RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CCDC69A6NI79 296 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 EFCAB7A8K855 629 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 TMEM110-MUSTN1A8MSY1 372 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 MAGEB17A8MXT2 336 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 KPNA7A9QM74 516 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 IDSB3KWA1 339 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 USP17L23D6RBM5 183 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 E7EWF7 191 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 TMEM178BH3BS89 294 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 K7ERI5 159 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 M0QZ24 198 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 DDX39AO00148 427 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 OGTO15294 1046 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 INPP4BO15327 924 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 CLDN3O15551 220 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 B4GALT5O43286 388 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 PIP5K1CO60331 668 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 CSDE1O75534 798 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 TNFSF15O95150 251 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 LUC7L3O95232 432 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 PLEKHA8P1O95397 391 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 DEXIO95424 95 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 CLPTM1O96005 669 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 LDHAP00338 332 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 HOXC4P09017 264 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 ALPIP09923 528 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 OR52Z1P0C646 297 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 FRMD6-AS1P0C7T7 363 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 FAM157CP0CG43 387 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 COX7A2P14406 83 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 XBP1P17861 261 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 TRIM21P19474 475 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 IDSP22304 550 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 WARSP23381 471 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 ANXA13P27216 316 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 EPHA2P29317 976 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 UGT1A5P35504 534 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 BRCC3P46736 316 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 RABIFP47224 123 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 CSNK1EP49674 416 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 ZNF131P52739 623 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 NDST2P52849 883 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 GALCP54803 685 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 RPS14P62263 151 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 SNRPFP62306 86 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 FOLH1Q04609 750 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 CDC20Q12834 499 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 PTP4A2Q12974 167 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 TBX2Q13207 712 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 DNAJC3Q13217 504 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 ZNF177Q13360 481 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 ALCAMQ13740 583 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 ELOCQ15369 112 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 PDCD2Q16342 344 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 MEA1Q16626 185 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 NFIL3Q16649 462 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 UBE2SQ16763 222 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 SLC39A12Q504Y0 691 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 DCST1Q5T197 706 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 HECTD3Q5T447 861 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 C10orf62Q5T681 223 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 ANKRD45Q5TZF3 282 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 FAM46CQ5VWP2 391 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 BSPRYQ5W0U4 402 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 SIGIRRQ6IA17 410 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 BHLHB9Q6PI77 547 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 XKRXQ6PP77 449 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 SLC22A25Q6T423 547 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 PRPF39Q86UA1 669 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 LRRTM4Q86VH4 590 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 TGIF2LYQ8IUE0 185 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 MCEMP1Q8IX19 187 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 IQCKQ8N0W5 287 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 ARHGAP18Q8N392 663 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 SLC25A45Q8N413 288 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 FBXO39Q8N4B4 442 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 ESX1Q8N693 406 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 TEX19Q8NA77 164 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 SLC38A9Q8NBW4 561 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 DDHD1Q8NEL9 900 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 ERMNQ8TAM6 284 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 ZCCHC10Q8TBK6 192 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 TBCKQ8TEA7 893 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 HTR3CQ8WXA8 447 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 RAB7BQ96AH8 199 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 TMEM143Q96AN5 459 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 ARSGQ96EG1 525 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 CPB2Q96IY4 423 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 PRAC1Q96KF2 57 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 SENP8Q96LD8 212 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 SPAG5Q96R06 1193 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 SEPT5Q99719 369 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 PKP2Q99959 881 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 SYT11Q9BT88 431 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 RAB34Q9BZG1 259 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 TRIM4Q9C037 500 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 ABCG4Q9H172 646 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 POLR3FQ9H1D9 316 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 ZBTB20Q9HC78 741 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 MCCC2Q9HCC0 563 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms