RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 PRKNO60260 465 aaPredicted RBP20.09■□□□□ 0.81
HOXA3-206ENST00000522788 SP1P08047 785 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 ABHD2P08910 425 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 SBK3P0C264 359 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 COL6A2P12110 1019 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 CD46P15529 392 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 EEF1DP29692 281 aaKnown RBP20.09■□□□□ 0.81
HOXA3-206ENST00000522788 RPS13P62277 151 aaKnown RBP20.09■□□□□ 0.81
HOXA3-206ENST00000522788 ELAVL1Q15717 326 aaKnown RBP20.09■□□□□ 0.81
HOXA3-206ENST00000522788 AP5B1Q2VPB7 878 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 OR4C11Q6IEV9 310 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 SLC25A25Q6KCM7 469 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 TAOK1Q7L7X3 1001 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 MYLK4Q86YV6 388 aaPredicted RBP20.09■□□□□ 0.81
HOXA3-206ENST00000522788 TMEM151AQ8N4L1 468 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 WDR20Q8TBZ3 569 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 PTPMT1Q8WUK0 201 aaPredicted RBP20.09■□□□□ 0.81
HOXA3-206ENST00000522788 ANKRD9Q96BM1 317 aaPredicted RBP20.09■□□□□ 0.81
HOXA3-206ENST00000522788 PHF21BQ96EK2 531 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 VMP1Q96GC9 406 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 MTERF1Q99551 399 aaKnown RBP20.09■□□□□ 0.81
HOXA3-206ENST00000522788 ZNF717Q9BY31 904 aaPredicted RBP20.09■□□□□ 0.81
HOXA3-206ENST00000522788 ALOXE3Q9BYJ1 711 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 NOL11Q9H8H0 719 aaKnown RBP20.09■□□□□ 0.81
HOXA3-206ENST00000522788 ZBTB26Q9HCK0 441 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 VTI1BQ9UEU0 232 aa20.09■□□□□ 0.81
HOXA3-206ENST00000522788 A1L4Q6 167 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 SYNDIG1LA6NDD5 238 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 TMEM200CA6NKL6 621 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 STX16-NPEPL1H3BU86 382 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 PLPP1O14494 284 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 STX16O14662 325 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 LRRTM2O43300 516 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 LDB3O75112 727 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 ETHE1O95571 254 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 SSR2P43308 183 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 PIK3CGP48736 1102 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 HLCSP50747 726 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 SLAMF1Q13291 335 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 CPSF6Q16630 551 aaKnown RBP eCLIP20.08■□□□□ 0.81
HOXA3-206ENST00000522788 TSNAXIP1Q2TAA8 658 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 GALNTL5Q7Z4T8 443 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 IFT20Q8IY31 132 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 LRRN4CLQ8ND94 238 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 OR52B6Q8NGF0 335 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 THAP3Q8WTV1 239 aaPredicted RBP20.08■□□□□ 0.81
HOXA3-206ENST00000522788 RGMAQ96B86 450 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 CDK15Q96Q40 435 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 TXLNGYQ9BZA5 131 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 FBXW2Q9UKT8 454 aa20.08■□□□□ 0.81
HOXA3-206ENST00000522788 RIPK2O43353 540 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 CLDN1O95832 211 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 SNRPAP09012 282 aaKnown RBP20.07■□□□□ 0.8
HOXA3-206ENST00000522788 FAM153BP0C7A2 387 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 CYB561P49447 251 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 NEK2P51955 445 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 ID2Q02363 134 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 ZRSR2Q15696 482 aaKnown RBP20.07■□□□□ 0.8
HOXA3-206ENST00000522788 FAM153CQ494X1 144 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 GFRALQ6UXV0 394 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 TRMT10CQ7L0Y3 403 aaKnown RBP20.07■□□□□ 0.8
HOXA3-206ENST00000522788 TMEM132CQ8N3T6 1108 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 ZCCHC7Q8N3Z6 543 aaKnown RBP20.07■□□□□ 0.8
HOXA3-206ENST00000522788 HORMAD2Q8N7B1 307 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 TMEM178AQ8NBL3 297 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 SCYL1Q96KG9 808 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 FRMD6Q96NE9 622 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 NSUN5Q96P11 429 aaKnown RBP20.07■□□□□ 0.8
HOXA3-206ENST00000522788 PRM3Q9NNZ6 103 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 PSD3Q9NYI0 1048 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 SEC14L3Q9UDX4 400 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 PCTPQ9UKL6 214 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 TMCO1Q9UM00 188 aa20.07■□□□□ 0.8
HOXA3-206ENST00000522788 ICE1Q9Y2F5 2266 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 EXOC1LA0A1B0GW35 172 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 NME2P1O60361 137 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 SLC25A12O75746 678 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 UNC5CO95185 931 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 CLDN9O95484 217 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 IFNA16P05015 189 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 RHOXF2BP0C7M4 288 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 NME2P22392 152 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 CPN2P22792 545 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 PTX3P26022 381 aaPredicted RBP20.06■□□□□ 0.8
HOXA3-206ENST00000522788 BSGP35613 385 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 ARFIP1P53367 373 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 HNRNPH2P55795 449 aaKnown RBP20.06■□□□□ 0.8
HOXA3-206ENST00000522788 IGLV3-21P80748 117 aaPredicted RBP20.06■□□□□ 0.8
HOXA3-206ENST00000522788 STX4Q12846 297 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 MRM1Q6IN84 353 aaKnown RBP20.06■□□□□ 0.8
HOXA3-206ENST00000522788 ADGRD1Q6QNK2 874 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 TIFABQ6ZNK6 161 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 C16orf47Q6ZP98 133 aaPredicted RBP20.06■□□□□ 0.8
HOXA3-206ENST00000522788 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.06■□□□□ 0.8
HOXA3-206ENST00000522788 ZNF321PQ8N8H1 164 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 REPS1Q96D71 796 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 MRPL57Q9BQC6 102 aaKnown RBP20.06■□□□□ 0.8
HOXA3-206ENST00000522788 RHOXF2Q9BQY4 288 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 NTMT1Q9BV86 223 aa20.06■□□□□ 0.8
HOXA3-206ENST00000522788 EPB41L4BQ9H329 900 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms