RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-233	ENST00000522052	BNIPL	Q7Z465	357 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	LRRC17	Q8N6Y2	441 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	CCDC197	Q8NCU1	140 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	OR52B4	Q8NGK2	314 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	GATAD1	Q8WUU5	269 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	ZNRF4	Q8WWF5	429 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	ZBTB9	Q96C00	473 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	OMA1	Q96E52	524 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	ZNF274	Q96GC6	653 aa	Predicted RBP	4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	MARK4	Q96L34	752 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	CXorf58	Q96LI9	332 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	NECTIN4	Q96NY8	510 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	CBWD1	Q9BRT8	395 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	THUMPD2	Q9BTF0	503 aa	Known RBP	4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	SLC26A1	Q9H2B4	701 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	HPS4	Q9NQG7	708 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	MRTO4	Q9UKD2	239 aa	Known RBP	4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	ENTPD4	Q9Y227	616 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	SNAPC4	Q5SXM2	1469 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	CLASP1	Q7Z460	1538 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	KIAA1210	Q9ULL0	1709 aa		4.41	□□□□□ -1.7
CTNNA1-233	ENST00000522052	MYH14	Q7Z406	1995 aa	Known RBP	4.4	□□□□□ -1.7
CTNNA1-233	ENST00000522052		A0A087WZY1	265 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052		A0A0G2JLW4	131 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	SMIM1	B2RUZ4	78 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	LMO7DN	F2Z398	122 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	SLC1A7	O00341	560 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	P2RY10	O00398	339 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	CCS	O14618	274 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	ECE2	O60344	883 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	ERVK-10	P10266	1014 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	GNS	P15586	552 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	ADSS	P30520	456 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	MTTP	P55157	894 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	NLRP11	P59045	1033 aa	Known RBP	4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	MYBPC1	Q00872	1141 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	PMP22	Q01453	160 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	SNX1	Q13596	522 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	EXOSC7	Q15024	291 aa	Known RBP	4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	FAM106A	Q4KMX7	169 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	ZNF585B	Q52M93	769 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	LDLRAP1	Q5SW96	308 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	IL23R	Q5VWK5	629 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	MCM10	Q7L590	875 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	YRDC	Q86U90	279 aa	Known RBP	4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	C17orf64	Q86WR6	236 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	GMCL1P1	Q8NEA9	526 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	OR10G8	Q8NGN5	311 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	SELENOM	Q8WWX9	145 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	FCGR1B	Q92637	280 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	HIST1H2AC	Q93077	130 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	ERGIC2	Q96RQ1	377 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	S100A14	Q9HCY8	104 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	VPS54	Q9P1Q0	977 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	TBK1	Q9UHD2	729 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	KIF3A	Q9Y496	699 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	CEP164	Q9UPV0	1460 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	RAD54L2	Q9Y4B4	1467 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	NEDD4	P46934	1319 aa		4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	TRIP12	Q14669	1992 aa	Predicted RBP	4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	PCF11	O94913	1555 aa	Known RBP	4.4	□□□□□ -1.71
CTNNA1-233	ENST00000522052	FAM172BP	A6NC97	362 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	IKBKB	O14920	756 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	ANGPT2	O15123	496 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	ADAM12	O43184	909 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	TRMU	O75648	421 aa	Known RBP	4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	CDC123	O75794	336 aa	Predicted RBP	4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	AP2A2	O94973	939 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	FGF19	O95750	216 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	EML2	O95834	649 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	KRT6B	P04259	564 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	ZCCHC18	P0CG32	403 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	TSPY4	P0CV99	314 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	TSPY10	P0CW01	314 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	HSPA5	P11021	654 aa	Known RBP	4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	GPX3	P22352	226 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	GLRA1	P23415	457 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	HLA-F	P30511	346 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	FEN1	P39748	380 aa	Known RBP	4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	SOX3	P41225	446 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	SLC6A8	P48029	635 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	KRT6C	P48668	564 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	FOXG1	P55316	489 aa	Predicted RBP	4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	ERVFC1-1	P60608	527 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	BTG1	P62324	171 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	TRA2B	P62995	288 aa	Known RBP	4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	CSNK2B	P67870	215 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	DRP2	Q13474	957 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	TEAD2	Q15562	447 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	C3AR1	Q16581	482 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	SPANXN4	Q5MJ08	99 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	SLC25A24	Q6NUK1	477 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	CACUL1	Q86Y37	369 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	ZDHHC17	Q8IUH5	632 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	TBC1D21	Q8IYX1	336 aa		4.39	□□□□□ -1.71
CTNNA1-233	ENST00000522052	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.39	□□□□□ -1.71

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