RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 OTOGLQ3ZCN5 2332 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 C1orf226A1L170 272 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 CHST10O43529 356 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 KRT16P08779 473 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 NR2F6P10588 404 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 DDX5P17844 614 aaKnown RBP20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 TNFRSF17Q02223 184 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 NFYCQ13952 458 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 PRSS53Q2L4Q9 553 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 YOD1Q5VVQ6 348 aaPredicted RBP20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 ANKRD46Q86W74 232 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 TMEM126BQ8IUX1 230 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 KIAA2013Q8IYS2 634 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 DSELQ8IZU8 1212 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 EXOSC8Q96B26 276 aaKnown RBP20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 KLHL29Q96CT2 875 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 RNF31Q96EP0 1072 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 BHLHE41Q9C0J9 482 aaPredicted RBP20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 WDR41Q9HAD4 459 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 MAU2Q9Y6X3 613 aa20.2■□□□□ 0.82
R3HCC1-208ENST00000522012 WASHC1A8K0Z3 465 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 ANKRD65E5RJM6 399 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 TMX2-CTNND1H3BSU7 103 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 PGRMC2O15173 223 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 MT-CO3P00414 261 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 CCL4P13236 92 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 ITGAXP20702 1163 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 EFNA1P20827 205 aaPredicted RBP20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 GCGRP47871 477 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 WNT3P56703 355 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 SHC2P98077 582 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 MAT1AQ00266 395 aaKnown RBP20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 C6orf10Q5SRN2 563 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 ANXA8L1Q5VT79 327 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 CDCP2Q5VXM1 449 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 CYB5D1Q6P9G0 228 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 SLCO6A1Q86UG4 719 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 PPP1R3BQ86XI6 285 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 KIF2BQ8N4N8 673 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 FAM47BQ8NA70 645 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 VPS37AQ8NEZ2 397 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 CIDECQ96AQ7 238 aaPredicted RBP20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 ITCHQ96J02 903 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 CSF3RQ99062 836 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 CMKLR1Q99788 373 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 CTRCQ99895 268 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 LRMDAQ9H2I8 198 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 APMAPQ9HDC9 416 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 GID8Q9NWU2 228 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 FAM120CQ9NX05 1096 aaKnown RBP20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 CDC14AQ9UNH5 594 aa20.19■□□□□ 0.82
R3HCC1-208ENST00000522012 MDC1Q14676 2089 aaKnown RBP20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 SPAARA0A1B0GVQ0 90 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 H0YIG0 161 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 DSCR3O14972 297 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 POLR1CO15160 346 aaPredicted RBP20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 TBX19O60806 448 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 SCRG1O75711 98 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 CPOXP36551 454 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 RAB38P57729 211 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 MC2RQ01718 297 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 IL11RAQ14626 422 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 ISXQ2M1V0 245 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 C1orf189Q5VU69 101 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 PWWP2BQ6NUJ5 590 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 FAM180BQ6P0A1 224 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 MSANTD1Q6ZTZ1 278 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 ERMP1Q7Z2K6 904 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 BPHLQ86WA6 291 aaPredicted RBP20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 SHISA5Q8N114 240 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 GTF2H4Q92759 462 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 MVB12AQ96EY5 273 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 C1orf21Q9H246 121 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 RPF2Q9H7B2 306 aaKnown RBP20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 ACTR5Q9H9F9 607 aaPredicted RBP20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 EHD3Q9NZN3 535 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 UTS2RQ9UKP6 389 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 SRPK3Q9UPE1 567 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 FAM186AA6NE01 2351 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 UNC13CQ8NB66 2214 aa20.18■□□□□ 0.82
R3HCC1-208ENST00000522012 PRSS51A0A1B0GVH4 220 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 A0A1B0GX78 115 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 FAM227AF5H4B4 570 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 CSO75390 466 aaKnown RBP20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 TIAF1O95411 115 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 CPSF4O95639 269 aaKnown RBP20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 CDK4P11802 303 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 OR1D4P47884 311 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 ID4P47928 161 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 SIM1P81133 766 aaPredicted RBP20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 SYT16Q17RD7 645 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 MPEG1Q2M385 716 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 SLC48A1Q6P1K1 146 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 C16orf89Q6UX73 402 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 ASRGL1Q7L266 308 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 DPP10Q8N608 796 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 BMPERQ8N8U9 685 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 NETO1Q8TDF5 533 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 ROPN1LQ96C74 230 aa20.17■□□□□ 0.82
R3HCC1-208ENST00000522012 INPP5KQ9BT40 448 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms