RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 FERP16591 822 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 FEN1P39748 380 aaKnown RBP2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 ASMTP46597 345 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 SLC6A12P48065 614 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 CCZ1BP86790 482 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 CCZ1P86791 482 aaPredicted RBP2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 KLHL30Q0D2K2 578 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 HEPACAMQ14CZ8 416 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 C3AR1Q16581 482 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 SNRNP48Q6IEG0 339 aaKnown RBP2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 Q6ZVQ6 151 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 CATSPERDQ86XM0 798 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 TCEANCQ8N8B7 351 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 OR56B1Q8NGI3 324 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 OR10V1Q8NGI7 309 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 C11orf52Q96A22 123 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 OMA1Q96E52 524 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 C16orf45Q96MC5 204 aaPredicted RBP2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 NSMCE2Q96MF7 247 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 CTAGE1Q96RT6 745 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 PCDHB18PQ96TA0 734 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 OVOL2Q9BRP0 275 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 CBWD1Q9BRT8 395 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 FTHL17Q9BXU8 183 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 NACAP1Q9BZK3 213 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 DPEP2Q9H4A9 486 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 VIPAS39Q9H9C1 493 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 NDUFA13Q9P0J0 144 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 POLKQ9UBT6 870 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 ANGPTL3Q9Y5C1 460 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 ARAP1Q96P48 1450 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 RAPGEF2Q9Y4G8 1499 aa2.96□□□□□ -1.94
HMGN1P28-201ENST00000521340 STK36Q9NRP7 1315 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 CC2D2AQ9P2K1 1620 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 IGHV3-20A0A0C4DH32 117 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 ARHGAP42A6NI28 874 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 C15orf61A6NNL5 157 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 BLOC1S5-TXNDC5H3BN57 136 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 CHADO15335 359 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 SIGLEC5O15389 551 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 PCDH7O60245 1069 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 LMX1BO60663 402 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 CDC123O75794 336 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 DIRAS3O95661 229 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 HPRP00739 348 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 HEXBP07686 556 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 CPA3P15088 417 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 DESP17661 470 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 AADACP22760 399 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 IL4RP24394 825 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 MARCKSP29966 332 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 MDH1P40925 334 aaKnown RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 SLC6A8P48029 635 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 FHITP49789 147 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 TKTL1P51854 596 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 LIMK2P53671 638 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 NLRP11P59045 1033 aaKnown RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 TRA2BP62995 288 aaKnown RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 IRX4P78413 519 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 GABPB1Q06547 395 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 HSPA14Q0VDF9 509 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 PPP1R8Q12972 351 aaKnown RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 PDZK1IP1Q13113 114 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 HNRNPDQ14103 355 aaKnown RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 EXOSC7Q15024 291 aaKnown RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 TAF7Q15545 349 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 CCDC40Q4G0X9 1142 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 TEX35Q5T0J7 233 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 ATP1A1-AS1Q5TC04 95 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 ABRAXAS1Q6UWZ7 409 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 TMEM64Q6YI46 380 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 MACC1Q6ZN28 852 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 CDHR3Q6ZTQ4 885 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 TMEM26Q6ZUK4 368 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 PTAR1Q7Z6K3 402 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 YRDCQ86U90 279 aaKnown RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 C17orf64Q86WR6 236 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 OR4N5Q8IXE1 308 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 ARL6IP6Q8N6S5 226 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 CCDC185Q8N715 623 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF540Q8NDQ6 660 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 GPRC5AQ8NFJ5 357 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 OR52B4Q8NGK2 314 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 OR13C5Q8NGS8 318 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 PNPLA2Q96AD5 504 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 DTNBP1Q96EV8 351 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF300Q96RE9 604 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 NKX3-1Q99801 234 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 PITPNM3Q9BZ71 974 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 DDX47Q9H0S4 455 aaKnown RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 ATG10Q9H0Y0 220 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 SLC26A1Q9H2B4 701 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 POLE3Q9NRF9 147 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 TMOD3Q9NYL9 352 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF319Q9P2F9 582 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 NARFQ9UHQ1 456 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 DIMT1Q9UNQ2 313 aaKnown RBP2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 C2CD2Q9Y426 696 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 ATG4BQ9Y4P1 393 aa2.95□□□□□ -1.94
HMGN1P28-201ENST00000521340 COLEC10Q9Y6Z7 277 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms