RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	SCRN2	Q96FV2	425 aa		6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	IMP4	Q96G21	291 aa	Known RBP	6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	HES6	Q96HZ4	224 aa		6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	C7orf26	Q96N11	449 aa		6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	QKI	Q96PU8	341 aa	Known RBP eCLIP	6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	GFM1	Q96RP9	751 aa	Known RBP	6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	FERMT1	Q9BQL6	677 aa		6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	TDRD1	Q9BXT4	1180 aa	Known RBP	6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	PCDH9	Q9HC56	1237 aa		6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	MBNL1	Q9NR56	388 aa	Known RBP	6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	NCKIPSD	Q9NZQ3	722 aa		6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	PACSIN2	Q9UNF0	486 aa	Predicted RBP	6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	RPL26L1	Q9UNX3	145 aa	Known RBP	6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	CHKB	Q9Y259	395 aa		6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	TNFRSF18	Q9Y5U5	241 aa		6.69	□□□□□ -1.34
SDCBP-208	ENST00000520228	SPTY2D1-AS1	A0A0U1RR47	76 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	GOLGA6L9	A6NEM1	432 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	NPIPB15	A6NHN6	443 aa	Predicted RBP	6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	CD8B2	A6NJW9	211 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	FLRT2	O43155	660 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	RGS14	O43566	566 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	SPRY3	O43610	288 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	KLK8	O60259	260 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	RECQL5	O94762	991 aa	Predicted RBP	6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	CRYAB	P02511	175 aa	Known RBP	6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	MMP2	P08253	660 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	ALPI	P09923	528 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	POU1F1	P28069	291 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	CPOX	P36551	454 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	CCR9	P51686	369 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	THOP1	P52888	689 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	LINC00205	P59089	165 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	EIF3E	P60228	445 aa	Known RBP	6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	PFN3	P60673	137 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	OTUD4	Q01804	1114 aa	Known RBP	6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	WASHC5	Q12768	1159 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	RALGDS	Q12967	914 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	PDE1C	Q14123	709 aa	Predicted RBP	6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	FZD2	Q14332	565 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	IRF4	Q15306	451 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	RPS6KA1	Q15418	735 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	SHB	Q15464	509 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	FAM182A	Q5T1J6	154 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	KDM7A	Q6ZMT4	941 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	PID1	Q7Z2X4	250 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	LURAP1L	Q8IV03	231 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	CDKL3	Q8IVW4	592 aa	Predicted RBP	6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	SLC22A18AS	Q8N1D0	253 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	LPCAT1	Q8NF37	534 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	METTL6	Q8TCB7	284 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	SAP25	Q8TEE9	199 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	HTR3C	Q8WXA8	447 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	ALS2CR12	Q96Q35	445 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	MCCC1	Q96RQ3	725 aa	Predicted RBP	6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	VAT1	Q99536	393 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	SLC25A51	Q9H1U9	297 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	KLHL8	Q9P2G9	620 aa	Predicted RBP	6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	A4GNT	Q9UNA3	340 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	CARD8	Q9Y2G2	431 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	PPP2R2C	Q9Y2T4	447 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228	PPIL1	Q9Y3C6	166 aa		6.68	□□□□□ -1.34
SDCBP-208	ENST00000520228		A0A0J9YYE9	177 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	SPAAR	A0A1B0GVQ0	90 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	ANKRD66	B4E2M5	251 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	NPIPB11	E5RHQ5	1161 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	ZNF189	O75820	626 aa	Predicted RBP	6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	TRBC1	P01850	177 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	CSF2	P04141	144 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	PCCB	P05166	539 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	PCNA	P12004	261 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	ITGAX	P20702	1163 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	LHCGR	P22888	699 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	TNNT3	P45378	269 aa	Predicted RBP	6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	HNRNPK	P61978	463 aa	Known RBP eCLIP	6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	ROR2	Q01974	943 aa	Known RBP	6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	GPS2	Q13227	327 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	HNF4G	Q14541	408 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	HIST2H2AC	Q16777	129 aa	Predicted RBP	6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	ESCO2	Q56NI9	601 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	ZNF542P	Q5EBM4	170 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	TPRG1L	Q5T0D9	272 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	LRRC66	Q68CR7	880 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	HSD11B1L	Q7Z5J1	315 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	TSPAN33	Q86UF1	283 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	PARG	Q86W56	976 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	ZNF567	Q8N184	647 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228		Q8N9P0	234 aa	Predicted RBP	6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	GJC3	Q8NFK1	279 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	TRIM58	Q8NG06	486 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	SPATA22	Q8NHS9	363 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	TADA1	Q96BN2	335 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	NUS1	Q96E22	293 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	SMIM14	Q96QK8	99 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	APOO	Q9BUR5	198 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	MLPH	Q9BV36	600 aa	Predicted RBP	6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	RBM38	Q9H0Z9	239 aa	Known RBP	6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	C10orf88	Q9H8K7	445 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	PCDHB16	Q9NRJ7	776 aa		6.67	□□□□□ -1.34
SDCBP-208	ENST00000520228	CTNNAL1	Q9UBT7	734 aa		6.67	□□□□□ -1.34

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