RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 SLC39A12Q504Y0 691 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 IFI44LQ53G44 452 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 PRSS42Q7Z5A4 293 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 TBC1D10CQ8IV04 446 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 NAT8LQ8N9F0 302 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 TRPV3Q8NET8 790 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 RASL10AQ92737 203 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 ERGIC2Q96RQ1 377 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 SSX3Q99909 188 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 STRADBQ9C0K7 418 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 MOB1AQ9H8S9 216 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 PSORS1C1Q9UIG5 152 aa4.37□□□□□ -1.71
NPM1-206ENST00000519955 PDHXO00330 501 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 ZNF749O43361 778 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 CRLF1O75462 422 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 AKAP3O75969 853 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 CD1DP15813 335 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 ZNF10P21506 573 aaPredicted RBP4.36□□□□□ -1.71
NPM1-206ENST00000519955 SHC1P29353 583 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 ZFP36L2P47974 494 aaKnown RBP4.36□□□□□ -1.71
NPM1-206ENST00000519955 NDUFV3P56181 108 aaKnown RBP4.36□□□□□ -1.71
NPM1-206ENST00000519955 FCHO2Q0JRZ9 810 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 MEF2DQ14814 521 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 SGCBQ16585 318 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 CAPN13Q6MZZ7 669 aaPredicted RBP4.36□□□□□ -1.71
NPM1-206ENST00000519955 MCM10Q7L590 875 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 KCNMB4Q86W47 210 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 C17orf64Q86WR6 236 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 CATSPER3Q86XQ3 398 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 ABHD12Q8N2K0 398 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 CCDC197Q8NCU1 140 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 C17orf47Q8NEP4 570 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 PRCCQ92733 491 aaPredicted RBP4.36□□□□□ -1.71
NPM1-206ENST00000519955 HAS2Q92819 552 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 ZNF597Q96LX8 424 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 S1PR3Q99500 378 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 DDX50Q9BQ39 737 aaKnown RBP4.36□□□□□ -1.71
NPM1-206ENST00000519955 NUSAP1Q9BXS6 441 aaKnown RBP4.36□□□□□ -1.71
NPM1-206ENST00000519955 OCR1Q9BZK8 76 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 TRIM6Q9C030 488 aaPredicted RBP4.36□□□□□ -1.71
NPM1-206ENST00000519955 TSPYL1Q9H0U9 437 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 WDR41Q9HAD4 459 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 PLEKHA3Q9HB20 300 aa4.36□□□□□ -1.71
NPM1-206ENST00000519955 FOXA2Q9Y261 457 aaPredicted RBP4.36□□□□□ -1.71
NPM1-206ENST00000519955 SLC15A5A6NIM6 579 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 GOSR1O95249 250 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 EPOP01588 193 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 IGHV3-13P01766 116 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 TNFSF10P50591 281 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 RIDAP52758 137 aaKnown RBP4.35□□□□□ -1.71
NPM1-206ENST00000519955 ADARP55265 1226 aaKnown RBP4.35□□□□□ -1.71
NPM1-206ENST00000519955 SLC8A3P57103 927 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 ECSCRQ19T08 205 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 TEX35Q5T0J7 233 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 CLEC1AQ8NC01 280 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 SSC4DQ8WTU2 575 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 FAM222BQ8WU58 562 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 TAF15Q92804 592 aaKnown RBP eCLIP4.35□□□□□ -1.71
NPM1-206ENST00000519955 FAM46BQ96A09 425 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 PDLIM5Q96HC4 596 aaKnown RBP4.35□□□□□ -1.71
NPM1-206ENST00000519955 PSMB7Q99436 277 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 HEXA-AS1Q9H8Q6 139 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 JPT2Q9H910 190 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 MARCH7Q9H992 704 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 THYN1Q9P016 225 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 EXOC7Q9UPT5 735 aa4.35□□□□□ -1.71
NPM1-206ENST00000519955 TRGV8A0A0C4DH27 118 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 BCLAF3A2AJT9 711 aaKnown RBP4.34□□□□□ -1.71
NPM1-206ENST00000519955 OR5H15A6NDH6 313 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 TMCO5BA8MYB1 307 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 K7EQG2 157 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 FBP2O00757 339 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 CSDE1O75534 798 aaKnown RBP4.34□□□□□ -1.71
NPM1-206ENST00000519955 CPNE6O95741 557 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 CT45A8P0DMV1 189 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 CT45A9P0DMV2 189 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 CYP3A5P20815 502 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 GLRA1P23415 457 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 ETV5P41161 510 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 KCNK10P57789 538 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 RIGQ13278 110 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 GIT2Q14161 759 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 FASTKQ14296 549 aaKnown RBP4.34□□□□□ -1.71
NPM1-206ENST00000519955 C2orf76Q3KRA6 126 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 CT45A2Q5DJT8 189 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 MUC21Q5SSG8 566 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 NEPROQ6NW34 567 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 ZNF730Q6ZMV8 503 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 SIDT2Q8NBJ9 832 aaKnown RBP4.34□□□□□ -1.71
NPM1-206ENST00000519955 PCNPQ8WW12 178 aaKnown RBP4.34□□□□□ -1.71
NPM1-206ENST00000519955 C5orf30Q96GV9 206 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 CCDC43Q96MW1 224 aaKnown RBP4.34□□□□□ -1.71
NPM1-206ENST00000519955 ANKRD27Q96NW4 1050 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 TNFRSF13CQ96RJ3 184 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 SOSTQ9BQB4 213 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 SP140LQ9H930 580 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 DEPPQ9NTK1 212 aa4.34□□□□□ -1.71
NPM1-206ENST00000519955 CWC25Q9NXE8 425 aaPredicted RBP4.34□□□□□ -1.71
NPM1-206ENST00000519955 MTRRQ9UBK8 725 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms