RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 CA13Q8N1Q1 262 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 SLC38A9Q8NBW4 561 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 OR51Q1Q8NH59 317 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 C16orf78Q8WTQ4 265 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 ZCCHC14Q8WYQ9 949 aaKnown RBP13.36□□□□□ -0.27
SDC2-203ENST00000519587 TBC1D20Q96BZ9 403 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 ZNF578Q96N58 590 aaPredicted RBP13.36□□□□□ -0.27
SDC2-203ENST00000519587 ZBTB18Q99592 522 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 WDR54Q9H977 334 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 KCNK13Q9HB14 408 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 PRDM9Q9NQV7 894 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 AIG1Q9NVV5 245 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 FBXW2Q9UKT8 454 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 DLGAP4Q9Y2H0 992 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 MSRB2Q9Y3D2 182 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 AHCTF1Q8WYP5 2266 aa13.36□□□□□ -0.27
SDC2-203ENST00000519587 SYNDIG1LA6NDD5 238 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 TRABD2BA6NFA1 517 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 CLDN4O14493 209 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 NDUFAB1O14561 156 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 RAD1O60671 282 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 ALBP02768 609 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 FHP07954 510 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 DRD2P14416 443 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 NCF2P19878 526 aaPredicted RBP13.35□□□□□ -0.27
SDC2-203ENST00000519587 ITGAXP20702 1163 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 PRPS1L1P21108 318 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 PPP2R1BP30154 601 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 ATP4BP51164 291 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 CLNS1AP54105 237 aaKnown RBP13.35□□□□□ -0.27
SDC2-203ENST00000519587 HNRNPH2P55795 449 aaKnown RBP13.35□□□□□ -0.27
SDC2-203ENST00000519587 TAS2R50P59544 299 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 SNRPNP63162 240 aaKnown RBP13.35□□□□□ -0.27
SDC2-203ENST00000519587 RUNX2Q13950 521 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 SQLEQ14534 574 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 OR52E8Q6IFG1 317 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 R3HCC1LQ7Z5L2 792 aaKnown RBP13.35□□□□□ -0.27
SDC2-203ENST00000519587 DTWD1Q8N5C7 304 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 ANKS4BQ8N8V4 417 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 OR5T3Q8NGG3 340 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.35□□□□□ -0.27
SDC2-203ENST00000519587 GATA6Q92908 595 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 PEX11GQ96HA9 241 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 TSSK3Q96PN8 268 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 MAPKAP1Q9BPZ7 522 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 BRINP2Q9C0B6 783 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 SLC26A1Q9H2B4 701 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 RABEP2Q9H5N1 569 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 MIEF1Q9NQG6 463 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 WASF3Q9UPY6 502 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 ARL2BPQ9Y2Y0 163 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 ASB4Q9Y574 426 aa13.35□□□□□ -0.27
SDC2-203ENST00000519587 IGLV3-12A0A075B6K2 115 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 C1orf226A1L170 272 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 TAF4O00268 1085 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 AIFM1O95831 613 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 CYC1P08574 325 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 IL3P08700 152 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 ALDOCP09972 364 aaKnown RBP13.34□□□□□ -0.27
SDC2-203ENST00000519587 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 G6PDP11413 515 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 STAT5AP42229 794 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 ALDH9A1P49189 494 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 DIO3P55073 304 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 MAT1AQ00266 395 aaKnown RBP13.34□□□□□ -0.27
SDC2-203ENST00000519587 SF3A3Q12874 501 aaKnown RBP eCLIP13.34□□□□□ -0.27
SDC2-203ENST00000519587 NCF4Q15080 339 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 TBC1D25Q3MII6 688 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 PDCD4Q53EL6 469 aaKnown RBP13.34□□□□□ -0.27
SDC2-203ENST00000519587 NDUFAF5Q5TEU4 345 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 FAM198BQ6UWH4 519 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 ZNF517Q6ZMY9 492 aaPredicted RBP13.34□□□□□ -0.27
SDC2-203ENST00000519587 COX15Q7KZN9 410 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 OVCH1Q7RTY7 1134 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 PIGWQ7Z7B1 504 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 ZNF595Q8IYB9 648 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 CACNA2D3Q8IZS8 1091 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 MIER2Q8N344 545 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 FAM47BQ8NA70 645 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 C7orf57Q8NEG2 295 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 BCAS4Q8TDM0 211 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 KIAA1143Q96AT1 154 aaPredicted RBP13.34□□□□□ -0.27
SDC2-203ENST00000519587 MTERF3Q96E29 417 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 RNF31Q96EP0 1072 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 CATSPER2Q96P56 530 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 PRPF18Q99633 342 aaKnown RBP13.34□□□□□ -0.27
SDC2-203ENST00000519587 SPRY4Q9C004 299 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 DPY30Q9C005 99 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 TGIF2Q9GZN2 237 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 CHST8Q9H2A9 424 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 GIMAP4Q9NUV9 329 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 TEX10Q9NXF1 929 aaPredicted RBP13.34□□□□□ -0.27
SDC2-203ENST00000519587 EHD3Q9NZN3 535 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 KCMF1Q9P0J7 381 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 CTSFQ9UBX1 484 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 PSME2Q9UL46 239 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 ATG4BQ9Y4P1 393 aa13.34□□□□□ -0.27
SDC2-203ENST00000519587 TEX51A0A1B0GUA7 166 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 C21orf140B9A014 251 aa13.33□□□□□ -0.28
SDC2-203ENST00000519587 PROM1O43490 865 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms