RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 EDARQ9UNE0 448 aa12.98□□□□□ -0.33
PABPC1-208ENST00000519004 IGKV6-21A0A0C4DH24 114 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 SLC28A1O00337 649 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 CASC3O15234 703 aaKnown RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 SIGLEC5O15389 551 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 LRRTM2O43300 516 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 LDB2O43679 373 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 BEST1O76090 585 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 TOXO94900 526 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 VTNP04004 478 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 CTPS1P17812 591 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 WARSP23381 471 aaKnown RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 HNMTP50135 292 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 ZP1P60852 638 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 RPS7P62081 194 aaKnown RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 HMGCS1Q01581 520 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 SIGLEC14Q08ET2 396 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 HFEQ30201 348 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 C18orf21Q32NC0 220 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 ASB18Q6ZVZ8 466 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 ASPGQ86U10 573 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 MCATQ8IVS2 390 aaKnown RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 LGI4Q8N135 537 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 CRYBG2Q8N1P7 616 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 OR9Q2Q8NGE9 314 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 NANPQ8TBE9 248 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 HSD17B8Q92506 261 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 EMID1Q96A84 441 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 DPH2Q9BQC3 489 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 HDHD2Q9H0R4 259 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 CXCL16Q9H2A7 254 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 ZNF768Q9H5H4 540 aaKnown RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 SYNDIG1Q9H7V2 258 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 AGO3Q9H9G7 860 aaKnown RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 GSN-AS1Q9NRJ2 163 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 MPP6Q9NZW5 540 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 HCN2Q9UL51 889 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 NEU3Q9UQ49 428 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 ASB4Q9Y574 426 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 SNX11Q9Y5W9 270 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 NPTNQ9Y639 398 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 ZNF646O15015 1829 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 TEX13CA0A0J9YWL9 993 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 TMEM229AB2RXF0 380 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 ZBTB42B2RXF5 422 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 IGHA2P01877 340 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 PRSS56P0CW18 603 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 TFPIP10646 304 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 LCN1P31025 176 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 ACLYP53396 1101 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 EPHA4P54764 986 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 RPS25P62851 125 aaKnown RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 FAM189BP81408 668 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 PURAQ00577 322 aaKnown RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 RBBP4Q09028 425 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 MAD2L1Q13257 205 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 DSG2Q14126 1118 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 GOLGA7Q7Z5G4 137 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 EIF4E3Q8N5X7 224 aaKnown RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 PROKR2Q8NFJ6 384 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 OR2T35Q8NGX2 323 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 OR52N1Q8NH53 320 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 OR52J3Q8NH60 311 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 LPPQ93052 612 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 SLC38A3Q99624 504 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 FAM126AQ9BYI3 521 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 EVA1AQ9H8M9 152 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 DDIT4Q9NX09 232 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 FTSJ1Q9UET6 329 aa12.97□□□□□ -0.33
PABPC1-208ENST00000519004 TSR3Q9UJK0 312 aaKnown RBP12.97□□□□□ -0.33
PABPC1-208ENST00000519004 RRN3P2A6NIE6 340 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 ZAR1LA6NP61 321 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 MPZL2O60487 215 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 TXNP10599 105 aaKnown RBP12.96□□□□□ -0.33
PABPC1-208ENST00000519004 CPEP16870 476 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 CNR2P34972 360 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 KIAA1024LP59773 190 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 EXOC3L2Q2M3D2 409 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 MEDAGQ5VYS4 303 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 ARRDC4Q8NCT1 418 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 OR4A15Q8NGL6 344 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 MOSPD2Q8NHP6 518 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 COQ8AQ8NI60 647 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 GTF3C2Q8WUA4 911 aaPredicted RBP12.96□□□□□ -0.33
PABPC1-208ENST00000519004 LRRC46Q96FV0 321 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 DMRTA2Q96SC8 542 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 COLEC11Q9BWP8 271 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 SLC39A8Q9C0K1 460 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 TKTL2Q9H0I9 626 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 ABCG5Q9H222 651 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 BIN3Q9NQY0 253 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 NDUFAF4Q9P032 175 aa12.96□□□□□ -0.33
PABPC1-208ENST00000519004 TRABD2BA6NFA1 517 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 RGS14O43566 566 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 SELLP14151 372 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 S100A3P33764 101 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 PIK3CGP48736 1102 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 IL10RBQ08334 325 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 IHHQ14623 411 aa12.96□□□□□ -0.34
PABPC1-208ENST00000519004 NCF4Q15080 339 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms