RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 SPINK14Q6IE38 97 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 H3F3CQ6NXT2 135 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 RPUSD3Q6P087 351 aaKnown RBP13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 TUBA3EQ6PEY2 450 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 ZYG11AQ6WRX3 759 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 UBE3DQ7Z6J8 389 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 FJX1Q86VR8 437 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 SRRM1Q8IYB3 904 aaKnown RBP13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 CA13Q8N1Q1 262 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 BANPQ8N9N5 519 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 PLPP5Q8NEB5 264 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 HUS1BQ8NHY5 278 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 SREK1Q8WXA9 508 aaKnown RBP13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 NR4A3Q92570 626 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 ATP6V1E2Q96A05 226 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 GAL3ST3Q96A11 431 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 TBC1D20Q96BZ9 403 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 VPS50Q96JG6 964 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 C5orf34Q96MH7 638 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 ZIM3Q96PE6 472 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 F2RL3Q96RI0 385 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 MS4A8Q9BY19 250 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 TSPAN10Q9H1Z9 355 aaPredicted RBP13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 ARGLU1Q9NWB6 273 aaPredicted RBP13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 ZNF225Q9UK10 706 aa13.25□□□□□ -0.29
TSNARE1-203ENST00000518928 ITPR2Q14571 2701 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 IGKV3D-11A0A0A0MRZ8 115 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 CCDC151A5D8V7 595 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 URADA6NGE7 173 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 MAGEB17A8MXT2 336 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 H0YIV9 168 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 PCDH17O14917 1159 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 ERI3O43414 337 aaKnown RBP13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 SPAG7O75391 227 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 SUPT7LO94864 414 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 CLDN9O95484 217 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 TGFB1P01137 390 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 CD96P40200 585 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 NEK2P51955 445 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 CCNG1P51959 295 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 PLA2G16P53816 162 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 OR4D2P58180 307 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 SLC26A5P58743 744 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 STXBP1P61764 594 aaKnown RBP13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 BTN3A2P78410 334 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 CLCQ05315 142 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 DDX39BQ13838 428 aaKnown RBP13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 ELOAQ14241 798 aaKnown RBP13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 ZRSR2Q15696 482 aaKnown RBP13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 KRT71Q3SY84 523 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 CCDC153Q494R4 210 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 ABHD17BQ5VST6 288 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 ABHD17CQ6PCB6 329 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 MAMDC2Q7Z304 686 aaPredicted RBP13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 ZNF227Q86WZ6 799 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 SLC22A9Q8IVM8 553 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 BCORP1Q8N888 145 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 MDS2Q8NDY4 140 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 OR2L5Q8NG80 312 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 OR4F6Q8NGB9 312 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 WDR20Q8TBZ3 569 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 TRPC4APQ8TEL6 797 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 UBE2E3Q969T4 207 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 L3HYPDHQ96EM0 354 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 QRFPRQ96P65 431 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 MTERF1Q99551 399 aaKnown RBP13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 REXO4Q9GZR2 422 aaKnown RBP13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 KCNK13Q9HB14 408 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 PRDM7Q9NQW5 492 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 KLHL1Q9NR64 748 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 MKS1Q9NXB0 559 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 PLLPQ9Y342 182 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 TSC22D4Q9Y3Q8 395 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 CSMD1Q96PZ7 3565 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 CENPEQ02224 2701 aa13.24□□□□□ -0.29
TSNARE1-203ENST00000518928 CACNA1DQ01668 2161 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 PRAMEF2O60811 474 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 DDAH2O95865 285 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 MYL2P10916 166 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 ARL1P40616 181 aaPredicted RBP13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 NR0B1P51843 470 aaKnown RBP13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 CEP85LQ5SZL2 805 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 LETMD1Q6P1Q0 360 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 NCCRP1Q6ZVX7 275 aaPredicted RBP13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 MILR1Q7Z6M3 343 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 NFAM1Q8NET5 270 aaPredicted RBP13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 MTFMTQ96DP5 389 aaKnown RBP13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 APOPT1Q96IL0 206 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 PTCHD1Q96NR3 888 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 OR1F2PQ96R84 312 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 CSF3RQ99062 836 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 RNF32Q9H0A6 362 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 OR51B5Q9H339 312 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 GSTO2Q9H4Y5 243 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 MMP25Q9NPA2 562 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 DMRT3Q9NQL9 472 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 SLC17A7Q9P2U7 560 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 SH3BGRL2Q9UJC5 107 aa13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 ZNF223Q9UK11 482 aaPredicted RBP13.23□□□□□ -0.29
TSNARE1-203ENST00000518928 PCDHGA11Q9Y5H2 935 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms