RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	SLAMF1	Q13291	335 aa		22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	OR1C1	Q15619	314 aa		22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	UBE3D	Q7Z6J8	389 aa		22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	ZCCHC7	Q8N3Z6	543 aa	Known RBP	22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	NFAM1	Q8NET5	270 aa	Predicted RBP	22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	OR14A16	Q8NHC5	309 aa		22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	SERPINI1	Q99574	410 aa		22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	LYAR	Q9NX58	379 aa	Known RBP	22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	KCMF1	Q9P0J7	381 aa		22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	PCTP	Q9UKL6	214 aa		22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	PPT2	Q9UMR5	302 aa		22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	PPIE	Q9UNP9	301 aa	Known RBP	22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	SHANK1	Q9Y566	2161 aa		22.6	■■□□□ 1.21
CNOT7-204	ENST00000518885	SCN2A	Q99250	2005 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	LRRC14B	A6NHZ5	514 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	SAP18	O00422	153 aa	Known RBP	22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	RTCA	O00442	366 aa	Known RBP	22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	SH3BGRL	O75368	114 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	RPS13	P62277	151 aa	Known RBP	22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	ZRSR2	Q15696	482 aa	Known RBP	22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	TEX35	Q5T0J7	233 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	CYP20A1	Q6UW02	462 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	ZNF793	Q6ZN11	406 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	CLNK	Q7Z7G1	428 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	GPR180	Q86V85	440 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	KIF2B	Q8N4N8	673 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	SSC4D	Q8WTU2	575 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	NR4A3	Q92570	626 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	TMEM125	Q96AQ2	219 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	CSF3R	Q99062	836 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	SLX1A	Q9BQ83	275 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	ALOXE3	Q9BYJ1	711 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	L2HGDH	Q9H9P8	463 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	WDR41	Q9HAD4	459 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	AHSP	Q9NZD4	102 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	LRFN1	Q9P244	771 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	VTI1B	Q9UEU0	232 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	FBXW2	Q9UKT8	454 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	RNF11	Q9Y3C5	154 aa		22.59	■■□□□ 1.21
CNOT7-204	ENST00000518885	TRBV11-1	A0A0K0K1C0	115 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	GSTA1	P08263	222 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	FAM153B	P0C7A2	387 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	TNNI3	P19429	210 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	CD96	P40200	585 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	CYB561	P49447	251 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	HNRNPF	P52597	415 aa	Known RBP	22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	MLF1	P58340	268 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	FAM153C	Q494X1	144 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	GGTA1P	Q4G0N0	100 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	FRG2	Q64ET8	278 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	MILR1	Q7Z6M3	343 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	MORN4	Q8NDC4	146 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	TMEM52	Q8NDY8	209 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	TANK	Q92844	425 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	FRG2B	Q96QU4	278 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	MAPKAP1	Q9BPZ7	522 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	TXLNGY	Q9BZA5	131 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	ELOVL6	Q9H5J4	265 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	SLC5A6	Q9Y289	635 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	STK38L	Q9Y2H1	464 aa		22.58	■■□□□ 1.21
CNOT7-204	ENST00000518885	PLPP1	O14494	284 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	OR7A17	O14581	309 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	ZFAND5	O76080	213 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	SEMA3D	O95025	777 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	TPP2	P29144	1249 aa	Predicted RBP	22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	NUDT13	Q86X67	352 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	ARMC10	Q8N2F6	343 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	APCDD1L	Q8NCL9	501 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	MDS2	Q8NDY4	140 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	WDR20	Q8TBZ3	569 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	NCLN	Q969V3	563 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	RPF2	Q9H7B2	306 aa	Known RBP	22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	NMRK1	Q9NWW6	199 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	ANKRD10	Q9NXR5	420 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885	COPS7A	Q9UBW8	275 aa		22.57	■■□□□ 1.2
CNOT7-204	ENST00000518885		A8MT66	165 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	RPS17	P08708	135 aa	Known RBP	22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	GCA	P28676	217 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	TNFRSF8	P28908	595 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	TRHR	P34981	398 aa	Predicted RBP	22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	HLCS	P50747	726 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	PER3	P56645	1201 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	HERVK_113	P63132	956 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	SRSF1	Q07955	248 aa	Known RBP eCLIP	22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	PAGE2	Q7Z2X7	111 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	SLC22A9	Q8IVM8	553 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	MYRIP	Q8NFW9	859 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	OR52B6	Q8NGF0	335 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	NPAS2	Q99743	824 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	PELO	Q9BRX2	385 aa	Known RBP	22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	C1QTNF3	Q9BXJ4	246 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	ERVK-6	Q9BXR3	956 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	SEMA4B	Q9NPR2	832 aa	Predicted RBP	22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	DCDC2	Q9UHG0	476 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	SNX6	Q9UNH7	406 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	CNTRL	Q7Z7A1	2325 aa		22.56	■■□□□ 1.2
CNOT7-204	ENST00000518885	ARHGAP10	A1A4S6	786 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	SP1	P08047	785 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	PLIN5	Q00G26	463 aa		22.55	■■□□□ 1.2
CNOT7-204	ENST00000518885	TNFRSF17	Q02223	184 aa		22.55	■■□□□ 1.2

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms