RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SPATA6Q9NWH7 488 aaPredicted RBP17.5■□□□□ 0.39
SDC2-202ENST00000518385 PDP1Q9P0J1 537 aaPredicted RBP17.5■□□□□ 0.39
SDC2-202ENST00000518385 FAM8A1Q9UBU6 413 aa17.5■□□□□ 0.39
SDC2-202ENST00000518385 PSORS1C1Q9UIG5 152 aa17.5■□□□□ 0.39
SDC2-202ENST00000518385 MMP17Q9ULZ9 603 aa17.5■□□□□ 0.39
SDC2-202ENST00000518385 NDRG2Q9UN36 371 aaKnown RBP17.5■□□□□ 0.39
SDC2-202ENST00000518385 SAMHD1Q9Y3Z3 626 aaKnown RBP17.5■□□□□ 0.39
SDC2-202ENST00000518385 A0A1W2PP55 124 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 FAM172BPA6NC97 362 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 KMOO15229 486 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 PRAMEF4O60810 478 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 ABCB1P08183 1280 aaPredicted RBP17.49■□□□□ 0.39
SDC2-202ENST00000518385 AMD1P17707 334 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 SOX6P35712 828 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 KRT20P35900 424 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 RPS21P63220 83 aaKnown RBP17.49■□□□□ 0.39
SDC2-202ENST00000518385 DNASE1L3Q13609 305 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 SIM2Q14190 667 aaPredicted RBP17.49■□□□□ 0.39
SDC2-202ENST00000518385 PRAMEF9Q5VWM5 478 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 TMEM236Q5W0B7 351 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 PDZD3Q86UT5 571 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 HEATR4Q86WZ0 1026 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 POC5Q8NA72 575 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 ATG16L2Q8NAA4 619 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 FLCNQ8NFG4 579 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 ZNF480Q8WV37 535 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 RAD51AP1Q96B01 352 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 MTFMTQ96DP5 389 aaKnown RBP17.49■□□□□ 0.39
SDC2-202ENST00000518385 MED8Q96G25 268 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 COPS4Q9BT78 406 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 EFCAB11Q9BUY7 163 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 OR52A5Q9H2C5 316 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 RMI1Q9H9A7 625 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 SPATA7Q9P0W8 599 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 VPS29Q9UBQ0 182 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 WNT16Q9UBV4 365 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 SERGEFQ9UGK8 458 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 DYRK1BQ9Y463 629 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 C19orf67A6NJJ6 358 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 PI15O43692 258 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 DNTTP04053 509 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 CDK1P06493 297 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 TRAPPC2P0DI81 140 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 TRAPPC2BP0DI82 140 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 CHRNB1P11230 501 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 ANXA8P13928 327 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 KELP23276 732 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 GGT2P36268 569 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 KIR3DL1P43629 444 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 ARHGAP19Q14CB8 494 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 TEAD4Q15561 434 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 TPRG1LQ5T0D9 272 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 TMEM92Q6UXU6 159 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 CACUL1Q86Y37 369 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 ZZZ3Q8IYH5 903 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 PLA2G15Q8NCC3 412 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 ASB12Q8WXK4 309 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 C1QTNF2Q9BXJ5 285 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 PHPT1Q9NRX4 125 aaPredicted RBP17.49■□□□□ 0.39
SDC2-202ENST00000518385 ADPRHL2Q9NX46 363 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 FBXL12Q9NXK8 326 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 VNN3Q9NY84 501 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 CRNNQ9UBG3 495 aaPredicted RBP17.49■□□□□ 0.39
SDC2-202ENST00000518385 UTS2RQ9UKP6 389 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 ACSL5Q9ULC5 683 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 CA14Q9ULX7 337 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 RUVBL1Q9Y265 456 aaKnown RBP17.49■□□□□ 0.39
SDC2-202ENST00000518385 TRAPPC4Q9Y296 219 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 PADI2Q9Y2J8 665 aa17.49■□□□□ 0.39
SDC2-202ENST00000518385 A0A075B6Q4 140 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 E7EQ34 232 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 ADAMDEC1O15204 470 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 MPZL2O60487 215 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 MITFO75030 526 aaPredicted RBP17.48■□□□□ 0.39
SDC2-202ENST00000518385 WBP4O75554 376 aaKnown RBP17.48■□□□□ 0.39
SDC2-202ENST00000518385 ZNF682O95780 498 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 PRIM2P49643 509 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 RPP38P78345 283 aaKnown RBP17.48■□□□□ 0.39
SDC2-202ENST00000518385 CCSMST1Q4G0I0 132 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 ZNF544Q6NX49 715 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 NOXRED1Q6NXP6 359 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 SLCO4C1Q6ZQN7 724 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 CEP68Q76N32 757 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 ZNF367Q7RTV3 350 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 GPR155Q7Z3F1 870 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 SYTL1Q8IYJ3 562 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 PHACTR4Q8IZ21 702 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 SYNPOQ8N3V7 929 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 KRTCAP2Q8N6L1 136 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 UBE2E3Q969T4 207 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 SIPA1Q96FS4 1042 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 OR4K3Q96R72 315 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 SNX18Q96RF0 628 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 ZDHHC5Q9C0B5 715 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 SLC6A17Q9H1V8 727 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 CFL2Q9Y281 166 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 PCDHGA3Q9Y5H0 932 aa17.48■□□□□ 0.39
SDC2-202ENST00000518385 CLCA1A8K7I4 914 aa17.47■□□□□ 0.39
SDC2-202ENST00000518385 MYO1GB0I1T2 1018 aa17.47■□□□□ 0.39
SDC2-202ENST00000518385 PLRG1O43660 514 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms