RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ZNF557Q8N988 423 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 POMGNT2Q8NAT1 580 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEM145Q8NBT3 493 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 BEND2Q8NDZ0 799 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 FBXO36Q8NEA4 188 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 DNAAF1Q8NEP3 725 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR2L8Q8NGY9 312 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR5J2Q8NH18 312 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SCARB1Q8WTV0 552 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 CHURC1Q8WUH1 139 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 CANT1Q8WVQ1 401 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TM9SF4Q92544 642 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 AP3S1Q92572 193 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 RAD54LQ92698 747 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMBIM1Q969X1 311 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 FUBP1Q96AE4 644 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLCO4A1Q96BD0 722 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAF2Q96CS3 445 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 FBXL20Q96IG2 436 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM71F1Q96KD3 344 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 PRMT6Q96LA8 375 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 CCDC140Q96MF4 163 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 LINC00052Q96N35 136 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SFXN2Q96NB2 322 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 WFIKKN1Q96NZ8 548 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 RNF157Q96PX1 679 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR2M2Q96R28 347 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ELF4Q99607 663 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 NUDT16L1Q9BRJ7 211 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEM175Q9BSA9 504 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 MARVELD1Q9BSK0 173 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SYT11Q9BT88 431 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 PI4K2AQ9BTU6 479 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 DPCDQ9BVM2 203 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 STRA6Q9BX79 667 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 REG4Q9BYZ8 158 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ACTR6Q9GZN1 396 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC25A32Q9H2D1 315 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 RHBGQ9H310 441 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TOR3AQ9H497 397 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 MVB12BQ9H7P6 319 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 AGO3Q9H9G7 860 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 CERS4Q9HA82 394 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 CACYBPQ9HB71 228 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 PTPRHQ9HD43 1115 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ANKEF1Q9NU02 776 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZFP57Q9NU63 452 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 BLOC1S4Q9NUP1 217 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 RBFOX1Q9NWB1 397 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEM45AQ9NWC5 275 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM118AQ9NWS6 357 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 VAPAQ9P0L0 249 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 GCNT4Q9P109 453 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 HCN3Q9P1Z3 774 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 CFAP97Q9P2B7 532 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 AASSQ9UDR5 926 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 NOCTQ9UK39 431 aaKnown RBP4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 OGDHLQ9ULD0 1010 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC39A10Q9ULF5 831 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TBC1D24Q9ULP9 559 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 USP18Q9UMW8 372 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 OAZ3Q9UMX2 235 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 TNFSF13BQ9Y275 285 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 NCKAP1Q9Y2A7 1128 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 DHRS7Q9Y394 339 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 NPFFR2Q9Y5X5 522 aa4.61□□□□□ -1.67
HMGB1P19-201ENST00000517578 A0A1B0GV90 55 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 A0A1W2PN81 502 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 LNP1A1A4G5 178 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEM218A2RU14 115 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM234BA2RU67 622 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SYNDIG1LA6NDD5 238 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 C5orf52A6NGY3 159 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 NCF1BA6NI72 391 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC15A5A6NIM6 579 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 A8MV72 311 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 NCF1CA8MVU1 366 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 KCNU1A8MYU2 1149 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 C22orf46C9J442 243 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PTGES3LE9PB15 166 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 NPIPA2E9PIF3 369 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 INMT-MINDY4F8WBC2 141 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 M0QZ92 97 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 DDX39AO00148 427 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ARNTLO00327 626 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PPP6CO00743 305 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF195O14628 629 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 CHADO15335 359 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 FABP7O15540 132 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 TXNL1O43396 289 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 GPRIN2O60269 458 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 NRP2O60462 931 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SOCS5O75159 536 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 VPS4BO75351 444 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 WBP4O75554 376 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 SORBS2O94875 1100 aaKnown RBP4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 GADD45GO95257 159 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PGLSO95336 258 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 PGK1P00558 417 aa4.6□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADAP00813 363 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms