RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 POLR2LP62875 67 aaKnown RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SELENOWP63302 87 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RPP38P78345 283 aaKnown RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CSNK1G2P78368 415 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CDK3Q00526 305 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 IL5RAQ01344 420 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SPIBQ01892 262 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 UBE3AQ05086 875 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ELP6Q0PNE2 266 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LRRC74AQ0VAA2 488 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CNTN1Q12860 1018 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RPA4Q13156 261 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FZD5Q13467 585 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GTF2H3Q13889 308 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SIM2Q14190 667 aaPredicted RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MLC1Q15049 377 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 EIF4HQ15056 248 aaKnown RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 IRF4Q15306 451 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CEBPEQ15744 281 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZIC1Q15915 447 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZNF630Q2M218 657 aaPredicted RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 WSCD2Q2TBF2 565 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 IFI44LQ53G44 452 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ARHGAP15Q53QZ3 475 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TOR1AIP1Q5JTV8 583 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FAM78AQ5JUQ0 283 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 IER5LQ5T953 404 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 KHDRBS2Q5VWX1 349 aaKnown RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SLX4IPQ5VYV7 408 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 EGFLAMQ63HQ2 1017 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 VASNQ6EMK4 673 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RAET1GQ6H3X3 334 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GPR153Q6NV75 609 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PGBD2Q6P3X8 592 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 VITQ6UXI7 678 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 AHSA2Q719I0 299 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MRGPREQ86SM8 312 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZNF554Q86TJ5 538 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HORMAD1Q86X24 394 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RNF130Q86XS8 419 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TRAPPC5Q8IUR0 188 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 EGFL6Q8IUX8 553 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CROCCP3Q8IVE0 287 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CACTIN-AS1Q8N1I8 211 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SVOPQ8N4V2 548 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FBXL6Q8N531 539 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CELF5Q8N6W0 485 aaKnown RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FAM181AQ8N9Y4 354 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 POGLUT1Q8NBL1 392 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZNF485Q8NCK3 441 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 MORN4Q8NDC4 146 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TTC16Q8NEE8 873 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZNF555Q8NEP9 628 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TMIEQ8NEW7 156 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR8D4Q8NGM9 314 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR6Q1Q8NGQ2 317 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR5K2Q8NHB8 316 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CDC26Q8NHZ8 85 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FLVCR1-AS1Q8TAF5 88 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HERVK_113Q902F9 699 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 FCGR1BQ92637 280 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PROX1Q92786 737 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 DIO2Q92813 273 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 UCN3Q969E3 161 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PPP1R14BQ96C90 147 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PPCDCQ96CD2 204 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TM4SF18Q96CE8 201 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TMEM19Q96HH6 336 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PPP1R16AQ96I34 528 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PAWRQ96IZ0 340 aaKnown RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZFYVE19Q96K21 471 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OPALINQ96PE5 141 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 KCNC2Q96PR1 638 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZNF347Q96SE7 839 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SARGQ9BW04 601 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 CDADC1Q9BWV3 514 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 LGR4Q9BXB1 951 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TEX101Q9BY14 249 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HDAC8Q9BY41 377 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZCCHC2Q9C0B9 1178 aaKnown RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SLC6A16Q9GZN6 736 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR2AG1Q9H205 316 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ADNPQ9H2P0 1102 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 OR51B5Q9H339 312 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NT5DC2Q9H857 520 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 REEP1Q9H902 201 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NMNAT1Q9HAN9 279 aaPredicted RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 ZBTB20Q9HC78 741 aaPredicted RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 HHATLQ9HCP6 504 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 NEUROD4Q9HD90 331 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PRSS16Q9NQE7 514 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TM7SF3Q9NS93 570 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 RHBDL2Q9NX52 303 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 TAS2R9Q9NYW1 312 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 SCHIP1Q9P0W5 487 aaPredicted RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 C5AR2Q9P296 337 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 BAG5Q9UL15 447 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 PNMA8BQ9ULN7 279 aaPredicted RBP3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 A4GNTQ9UNA3 340 aa3.09□□□□□ -1.91
SCARNA20.6-201ENST00000517251 GPR34Q9UPC5 381 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms