RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CCSAPQ6IQ19 270 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 TRMT11Q7Z4G4 463 aaKnown RBP-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 MMD2Q8IY49 270 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 XXYLT1Q8NBI6 393 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 KIAA1191Q96A73 305 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 SNRNP40Q96DI7 357 aaKnown RBP-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 KLHL15Q96M94 604 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 RPS6KC1Q96S38 1066 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 SHANK2-AS3Q9BTD1 123 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 CARD6Q9BX69 1037 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 CARD9Q9H257 536 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 APMAPQ9HDC9 416 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 ASAH2Q9NR71 780 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 ABCB8Q9NUT2 735 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 CWC15Q9P013 229 aaKnown RBP-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 CRNNQ9UBG3 495 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 UBQLN2Q9UHD9 624 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 RPS6KA6Q9UK32 745 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 MKLN1Q9UL63 735 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 NAP1L2Q9ULW6 460 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 CEP83Q9Y592 693 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 S4R3C0 116 aa-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 COL1A1P02452 1464 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-539P-201ENST00000516665 TICRRQ7Z2Z1 1910 aa-1.66□□□□□ -2.67
RNU6-539P-201ENST00000516665 ZNF320A2RRD8 509 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 ZNF705GA8MUZ8 300 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 CCL24O00175 119 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 ZBED4O75132 1171 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 OR9G9P0C7N8 305 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 ZNF688P0C7X2 276 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 PAX3P23760 479 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 ACAT1P24752 427 aaKnown RBP-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 PIP4K2AP48426 406 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 SLC1A6P48664 564 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 SNRPEP62304 92 aaKnown RBP-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 PPP2R2BQ00005 443 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 ZNF616Q08AN1 781 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 MICAQ29983 383 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 DCAF4L1Q3SXM0 396 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 UGT3A2Q3SY77 523 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 INTS11Q5TA45 600 aaKnown RBP-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 PAQR9Q6ZVX9 377 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 TRPM8Q7Z2W7 1104 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 ADM2Q7Z4H4 148 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 RASGEF1AQ8N9B8 481 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 CCDC107Q8WV48 283 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 CASP10Q92851 521 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 MAELQ96JY0 434 aaKnown RBP-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 TMEM68Q96MH6 324 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 KCNA7Q96RP8 456 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 NPAS2Q99743 824 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 TIGARQ9NQ88 270 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 ZNF629Q9UEG4 869 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 RIPOR2Q9Y4F9 1068 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 LIPGQ9Y5X9 500 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 ACEP12821 1306 aa-1.66□□□□□ -2.68
RNU6-539P-201ENST00000516665 ZANQ9Y493 2812 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TSPY2A6NKD2 308 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 AP3D1O14617 1153 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 NDUFS4O43181 175 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 AHCYL1O43865 530 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 OR10H2O60403 315 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 PQBP1O60828 265 aaKnown RBP-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 BBOX1O75936 387 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 FSTL3O95633 263 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TBX18O95935 607 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TSPY3P0CV98 308 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TSPY4P0CV99 314 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TSPY8P0CW00 308 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TSPY10P0CW01 314 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 GLULP15104 373 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TNFSF4P23510 183 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 ACADLP28330 430 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 ARL1P40616 181 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 MSH2P43246 934 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 ZNF85Q03923 595 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 PIN1Q13526 163 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 GRM3Q14832 879 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 PIGGQ5H8A4 983 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 SULT6B1Q6IMI4 303 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 SULT1C3Q6IMI6 304 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 C1orf94Q6P1W5 598 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 HSD17B13Q7Z5P4 300 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 MEX3DQ86XN8 651 aaKnown RBP-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 UBALD2Q8IYN6 164 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TMEM104Q8NE00 496 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TNIP2Q8NFZ5 429 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 OR10Q1Q8NGQ4 319 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 C7orf33Q8WU49 177 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 IL4I1Q96RQ9 567 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 ZNF607Q96SK3 696 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TTYH2Q9BSA4 534 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TAOK3Q9H2K8 898 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 EML4Q9HC35 981 aaKnown RBP-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 OBP2BQ9NPH6 170 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TBC1D13Q9NVG8 400 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 CNOT8Q9UFF9 292 aaKnown RBP-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 LCMT1Q9UIC8 334 aa-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 HBS1LQ9Y450 684 aaKnown RBP-1.67□□□□□ -2.68
RNU6-539P-201ENST00000516665 TBX22Q9Y458 520 aa-1.67□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms