RNA–Protein interactions for RNA: ENST00000515838.2

RBM4-209, Transcript of RNA binding motif protein 4, human

TSL 2

Gene RBM4, Length 943 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-209	ENST00000515838	FAM47B	Q8NA70	645 aa		13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	ZFP62	Q8NB50	900 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	OR5L2	Q8NGL0	311 aa		13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	C16orf52	Q8NHV5	167 aa		13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	FBF1	Q8TES7	1133 aa		13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	ZNF473	Q8WTR7	871 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	NCLN	Q969V3	563 aa		13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	REPS1	Q96D71	796 aa		13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	ATOH8	Q96SQ7	321 aa		13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	VKORC1	Q9BQB6	163 aa		13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	UNK	Q9C0B0	810 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	ALG9	Q9H6U8	611 aa		13.91	□□□□□ -0.18
RBM4-209	ENST00000515838	PRDM7	Q9NQW5	492 aa		13.91	□□□□□ -0.18
RBM4-209	ENST00000515838		A0A0G2JN53	185 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838		A8MUA0	341 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	SUPT3H	B4E1H0	165 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	TFEC	O14948	347 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	SUPT3H	O75486	399 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	IFNA16	P05015	189 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	EPOR	P19235	508 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	CD22	P20273	847 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	HIST1H1T	P22492	207 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	GUCY2D	Q02846	1103 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	BMPR2	Q13873	1038 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	LIPJ	Q5W064	366 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	GRHL2	Q6ISB3	625 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	PAOX	Q6QHF9	649 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	CPSF7	Q8N684	471 aa	Known RBP	13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	ACOT4	Q8N9L9	421 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	OR7G3	Q8NG95	312 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	F2RL3	Q96RI0	385 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	KCMF1	Q9P0J7	381 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	MYOT	Q9UBF9	498 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	COPS7A	Q9UBW8	275 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	ERVK-11	Q9UQG0	969 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	MEMO1	Q9Y316	297 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	PCDHGA11	Q9Y5H2	935 aa		13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	TNPO3	Q9Y5L0	923 aa	Known RBP	13.9	□□□□□ -0.18
RBM4-209	ENST00000515838	ADGRG4	Q8IZF6	3080 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838		A8MVJ9	347 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	PEX1	O43933	1283 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	PRAMEF4	O60810	478 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	ATP5A1	P25705	553 aa	Known RBP	13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	HTR1E	P28566	365 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	TLX1	P31314	330 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	SSR2	P43308	183 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	MEOX1	P50221	254 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	ALDH18A1	P54886	795 aa	Known RBP	13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	MRPS25	P82663	173 aa	Known RBP	13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	TBL3	Q12788	808 aa	Known RBP	13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	ACAP2	Q15057	778 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	C10orf62	Q5T681	223 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	PRAMEF9	Q5VWM5	478 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	C8orf74	Q6P047	294 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	ARHGAP11A	Q6P4F7	1023 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	ZDHHC24	Q6UX98	284 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	CMC1	Q7Z7K0	106 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	SULF2	Q8IWU5	870 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	GOLM1	Q8NBJ4	401 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	PSD4	Q8NDX1	1056 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	ASB15	Q8WXK1	588 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	EXT2	Q93063	718 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	ESAM	Q96AP7	390 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	RGMA	Q96B86	450 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	ART5	Q96L15	291 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	SGCZ	Q96LD1	299 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	PELO	Q9BRX2	385 aa	Known RBP	13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	ALOXE3	Q9BYJ1	711 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	PRM3	Q9NNZ6	103 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	IGSF5	Q9NSI5	407 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	HPF1	Q9NWY4	346 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	PSD3	Q9NYI0	1048 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	PHF11	Q9UIL8	331 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	SH3BGRL2	Q9UJC5	107 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	TINAG	Q9UJW2	476 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	ZNF223	Q9UK11	482 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	TMCO1	Q9UM00	188 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	ANGPTL3	Q9Y5C1	460 aa		13.89	□□□□□ -0.19
RBM4-209	ENST00000515838	DNAJC13	O75165	2243 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	ARHGAP10	A1A4S6	786 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	TGFBR3L	H3BV60	316 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	ACOT7	O00154	380 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	CLDN14	O95500	239 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	SERPINB8	P50452	374 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	HNRNPF	P52597	415 aa	Known RBP	13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	SETDB1	Q15047	1291 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	DEPDC1	Q5TB30	811 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	OPN5	Q6U736	354 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	SYT10	Q6XYQ8	523 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	GK5	Q6ZS86	529 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	GDF7	Q7Z4P5	450 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	RELL1	Q8IUW5	271 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	DND1	Q8IYX4	353 aa	Known RBP	13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	TMEM52	Q8NDY8	209 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	TANK	Q92844	425 aa		13.88	□□□□□ -0.19
RBM4-209	ENST00000515838	CSF3R	Q99062	836 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms