RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 LGSNQ5TDP6 509 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 C18orf63Q68DL7 685 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 TUBA3EQ6PEY2 450 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 TIFABQ6ZNK6 161 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 MILR1Q7Z6M3 343 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 RPS19BP1Q86WX3 136 aaKnown RBP10.74□□□□□ -0.69
VCAN-212ENST00000515397 FAM26EQ8N5C1 309 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 TRPC4APQ8TEL6 797 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 FAR1Q8WVX9 515 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 UBLCP1Q8WVY7 318 aaPredicted RBP10.74□□□□□ -0.69
VCAN-212ENST00000515397 NCLNQ969V3 563 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 RGMAQ96B86 450 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 PPWD1Q96BP3 646 aaKnown RBP10.74□□□□□ -0.69
VCAN-212ENST00000515397 SEC16BQ96JE7 1060 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 UTP23Q9BRU9 249 aaKnown RBP10.74□□□□□ -0.69
VCAN-212ENST00000515397 DEFB126Q9BYW3 111 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 MRPL46Q9H2W6 279 aaKnown RBP10.74□□□□□ -0.69
VCAN-212ENST00000515397 C12orf65Q9H3J6 166 aaKnown RBP10.74□□□□□ -0.69
VCAN-212ENST00000515397 FARSBQ9NSD9 589 aaKnown RBP10.74□□□□□ -0.69
VCAN-212ENST00000515397 TEKT2Q9UIF3 430 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 ZNF223Q9UK11 482 aaPredicted RBP10.74□□□□□ -0.69
VCAN-212ENST00000515397 ATG4BQ9Y4P1 393 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 MMACHCQ9Y4U1 282 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 PCDHGA11Q9Y5H2 935 aa10.74□□□□□ -0.69
VCAN-212ENST00000515397 ZGRF1Q86YA3 2104 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 ICE1Q9Y2F5 2266 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 BLACEA4D250 179 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 TMPRSS11DO60235 418 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 FGF17O60258 216 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 DLX3O60479 287 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 PRAMEF2O60811 474 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 CTNSO60931 367 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 TNNI3P19429 210 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 PTX3P26022 381 aaPredicted RBP10.73□□□□□ -0.69
VCAN-212ENST00000515397 MST1P26927 711 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 TPP2P29144 1249 aaPredicted RBP10.73□□□□□ -0.69
VCAN-212ENST00000515397 HPDP32754 393 aaPredicted RBP10.73□□□□□ -0.69
VCAN-212ENST00000515397 HNRNPH2P55795 449 aaKnown RBP10.73□□□□□ -0.69
VCAN-212ENST00000515397 HSD17B7P56937 341 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 TAS2R50P59544 299 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 AP2B1P63010 937 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 STX4Q12846 297 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 TRAF3Q13114 568 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 OR1C1Q15619 314 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 TMEM35AQ53FP2 167 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 UNC50Q53HI1 259 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 TCHHL1Q5QJ38 904 aaPredicted RBP10.73□□□□□ -0.69
VCAN-212ENST00000515397 TTC19Q6DKK2 380 aaPredicted RBP10.73□□□□□ -0.69
VCAN-212ENST00000515397 DGAT2L6Q6ZPD8 337 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 ZNF595Q8IYB9 648 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 SLC5A8Q8N695 610 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 L3MBTL4Q8NA19 623 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 APCDD1LQ8NCL9 501 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 OR4F6Q8NGB9 312 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 WDR20Q8TBZ3 569 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 PTPMT1Q8WUK0 201 aaPredicted RBP10.73□□□□□ -0.69
VCAN-212ENST00000515397 ANKRD9Q96BM1 317 aaPredicted RBP10.73□□□□□ -0.69
VCAN-212ENST00000515397 ZBTB9Q96C00 473 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 HBEGFQ99075 208 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 BARD1Q99728 777 aaKnown RBP10.73□□□□□ -0.69
VCAN-212ENST00000515397 SLC29A3Q9BZD2 475 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 TSPAN10Q9H1Z9 355 aaPredicted RBP10.73□□□□□ -0.69
VCAN-212ENST00000515397 ANKZF1Q9H8Y5 726 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 AGPAT4Q9NRZ5 378 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.73□□□□□ -0.69
VCAN-212ENST00000515397 ZNF225Q9UK10 706 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 OSGIN2Q9Y236 505 aa10.73□□□□□ -0.69
VCAN-212ENST00000515397 V9GYY5 206 aaPredicted RBP10.73□□□□□ -0.69
VCAN-212ENST00000515397 IQANK1A0A1B0GTG1 560 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 A0A1W2PS29 197 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 CCDC189A1A4V9 331 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 CLEC18AA5D8T8 446 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 H0YIV9 168 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 STX16-NPEPL1H3BU86 382 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 STX16O14662 325 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 RASAL1O95294 804 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 RPS17P08708 135 aaKnown RBP10.72□□□□□ -0.69
VCAN-212ENST00000515397 BSGP35613 385 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 HSD17B3P37058 310 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 PIK3CBP42338 1070 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 MLF1P58340 268 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 MAPKAPK3Q16644 382 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 LETMD1Q6P1Q0 360 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 FAM180AQ6UWF9 173 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 CLEC18BQ6UXF7 455 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 GPR180Q86V85 440 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 CLEC18CQ8NCF0 446 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 SRFBP1Q8NEF9 429 aaKnown RBP10.72□□□□□ -0.69
VCAN-212ENST00000515397 B3GNT7Q8NFL0 401 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 OR2W6PQ8NHA6 318 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 SUN3Q8TAQ9 357 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 EPS8L3Q8TE67 593 aaKnown RBP10.72□□□□□ -0.69
VCAN-212ENST00000515397 ZNF483Q8TF39 744 aaPredicted RBP10.72□□□□□ -0.69
VCAN-212ENST00000515397 MZB1Q8WU39 189 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 ZNF717Q9BY31 904 aaPredicted RBP10.72□□□□□ -0.69
VCAN-212ENST00000515397 MRPL1Q9BYD6 325 aaKnown RBP10.72□□□□□ -0.69
VCAN-212ENST00000515397 OR8D2Q9GZM6 311 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 ROGDIQ9GZN7 287 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 LYRM4Q9HD34 91 aa10.72□□□□□ -0.69
VCAN-212ENST00000515397 OLAHQ9NV23 265 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms