RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 NDOR1Q9UHB4 597 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 NXT1Q9UKK6 140 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 KLK13Q9UKR3 277 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 ARL2BPQ9Y2Y0 163 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 POLR3HQ9Y535 204 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 SPACA6W5XKT8 324 aa11.31□□□□□ -0.6
PDLIM5-220ENST00000514830 AHCTF1Q8WYP5 2266 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 C1orf226A1L170 272 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 STMND1H3BQB6 276 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 B3GALT4O96024 378 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 CCNYL3P0C7X3 344 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 G6PDP11413 515 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 SPINK2P20155 84 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 PRPS1L1P21108 318 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 JAK1P23458 1154 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 TACR1P25103 407 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 TLX1P31314 330 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 BUD31P41223 144 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 OR1D4P47884 311 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 DIO3P55073 304 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 BIKQ13323 160 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 PDE7AQ13946 482 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 HEPACAMQ14CZ8 416 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 DPY19L1Q2PZI1 675 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 ARHGAP40Q5TG30 622 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 NXNQ6DKJ4 435 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 FOXR1Q6PIV2 292 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 TIPARPQ7Z3E1 657 aaKnown RBP11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 CAMKMTQ7Z624 323 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 MARCH9Q86YJ5 346 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 ZNF595Q8IYB9 648 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 NLGN4XQ8N0W4 816 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 LIX1Q8N485 282 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 DTWD1Q8N5C7 304 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 GLB1L3Q8NCI6 653 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 NLGN4YQ8NFZ3 816 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 OR5T3Q8NGG3 340 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 GATA6Q92908 595 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 COL26A1Q96A83 441 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 TESCQ96BS2 214 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 TBC1D20Q96BZ9 403 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 RILPQ96NA2 401 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 MAPKAP1Q9BPZ7 522 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 C1orf50Q9BV19 199 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 FAIM2Q9BWQ8 316 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 FAM107BQ9H098 131 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 ACTL8Q9H568 366 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 RABEP2Q9H5N1 569 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 ZIM2Q9NZV7 527 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 ZNF282Q9UDV7 671 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 PADI1Q9ULC6 663 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 MRPS33Q9Y291 106 aaKnown RBP11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 ATG4BQ9Y4P1 393 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 MMACHCQ9Y4U1 282 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 PCDHA9Q9Y5H5 950 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 SCN2AQ99250 2005 aa11.3□□□□□ -0.6
PDLIM5-220ENST00000514830 PKD1L2Q7Z442 2459 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 A0A1W2PR48 441 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 TRABD2BA6NFA1 517 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 ZNF860A6NHJ4 632 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 C21orf140B9A014 251 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 E9PBE3 544 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 AGRPO00253 132 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 TERTO14746 1132 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 PCDH17O14917 1159 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 BRINP1O60477 761 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 KLHL41O60662 606 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 CCDC22O60826 627 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 DNAJB6O75190 326 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 BMP10O95393 424 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 GBAP04062 536 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 NR2F6P10588 404 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 DDX5P17844 614 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 DDCP20711 480 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 PPP2R1BP30154 601 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 STAT5AP42229 794 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 CLNS1AP54105 237 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 HSD17B7P56937 341 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 TAS2R50P59544 299 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 IGLV3-21P80748 117 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 SQLEQ14534 574 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 PTGR1Q14914 329 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 NDUFAF5Q5TEU4 345 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 C1orf189Q5VU69 101 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 TMEM198Q66K66 360 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 OR52E8Q6IFG1 317 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 FAM198BQ6UWH4 519 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 R3HCC1LQ7Z5L2 792 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 ZC3H7AQ8IWR0 971 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 MIER2Q8N344 545 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 TMEM132CQ8N3T6 1108 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 NATD1Q8N6N6 113 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 GALNT6Q8NCL4 622 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 BCAS4Q8TDM0 211 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 TANKQ92844 425 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 EGLN2Q96KS0 407 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 EBPLQ9BY08 206 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 GPR87Q9BY21 358 aa11.29□□□□□ -0.6
PDLIM5-220ENST00000514830 WDR41Q9HAD4 459 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms