RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SPIDRQ14159 915 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 ZNF630Q2M218 657 aaPredicted RBP14.18□□□□□ -0.14
VCAN-211ENST00000513984 ZNF542PQ5EBM4 170 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 KRT80Q6KB66 452 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 CCDC80Q76M96 950 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 PIWIL3Q7Z3Z3 882 aaKnown RBP14.18□□□□□ -0.14
VCAN-211ENST00000513984 TAF8Q7Z7C8 310 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 VTCN1Q7Z7D3 282 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 TRIM73Q86UV7 250 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 DCP2Q8IU60 420 aaKnown RBP14.18□□□□□ -0.14
VCAN-211ENST00000513984 DHRSXQ8N5I4 330 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 SLC37A2Q8TED4 501 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 GAL3ST3Q96A11 431 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 SHDQ96IW2 340 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 CDX2Q99626 313 aaPredicted RBP14.18□□□□□ -0.14
VCAN-211ENST00000513984 OSBPL10Q9BXB5 764 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 TMEM121BQ9BXQ6 578 aaPredicted RBP14.18□□□□□ -0.14
VCAN-211ENST00000513984 FOXQ1Q9C009 403 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 PCED1AQ9H1Q7 454 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 ADPRHL2Q9NX46 363 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 MAP4K5Q9Y4K4 846 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 MAGED1Q9Y5V3 778 aaPredicted RBP14.18□□□□□ -0.14
VCAN-211ENST00000513984 TMEM131Q92545 1883 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 GSAPA4D1B5 854 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 FAM170BA6NMN3 283 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 TMEM229AB2RXF0 380 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 FABP3P05413 133 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 GNAO1P09471 354 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 CTSEP14091 401 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 PRIM2P49643 509 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 CASP9P55211 416 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 ADARB1P78563 741 aaKnown RBP14.18□□□□□ -0.14
VCAN-211ENST00000513984 VLDLRP98155 873 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 PPP2R2BQ00005 443 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 RELAQ04206 551 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 RGS1Q08116 209 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 HSPB3Q12988 150 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 FCRL6Q6DN72 434 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 FBXO42Q6P3S6 717 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 USP51Q70EK9 711 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 ASPGQ86U10 573 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 SLC30A8Q8IWU4 369 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 UCN3Q969E3 161 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 TM4SF19Q96DZ7 209 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 THAP11Q96EK4 314 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 OR2A5Q96R48 311 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 TM9SF3Q9HD45 589 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 SLC35C2Q9NQQ7 365 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 PADI4Q9UM07 663 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 ABCG2Q9UNQ0 655 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 SNX8Q9Y5X2 465 aa14.18□□□□□ -0.14
VCAN-211ENST00000513984 A0A1W2PR48 441 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 METTL12A8MUP2 240 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 C2orf74A8MZ97 194 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 H0YAE9 185 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 SUV39H1O43463 412 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 LINGO3P0C6S8 592 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 THRBP10828 461 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 CD27P26842 260 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 CERS1P27544 350 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 CDK9P50750 372 aaKnown RBP14.17□□□□□ -0.14
VCAN-211ENST00000513984 DSTNP60981 165 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 KCNJ10P78508 379 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 CDK6Q00534 326 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 PUS10Q3MIT2 529 aaKnown RBP14.17□□□□□ -0.14
VCAN-211ENST00000513984 OR2T5Q6IEZ7 315 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 FIGLAQ6QHK4 219 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 SPESP1Q6UW49 350 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 TMEM179BQ7Z7N9 219 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 HIPK1Q86Z02 1210 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 RBM12BQ8IXT5 1001 aaKnown RBP14.17□□□□□ -0.14
VCAN-211ENST00000513984 GJD3Q8N144 294 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 PJA1Q8NG27 643 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 OR2T29Q8NH02 315 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 OR10G6Q8NH81 332 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 NFKBIDQ8NI38 313 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 CYGBQ8WWM9 190 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 FCRL4Q96PJ5 515 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 NELL2Q99435 816 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 RBM4BQ9BQ04 359 aaKnown RBP14.17□□□□□ -0.14
VCAN-211ENST00000513984 DOHHQ9BU89 302 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 LRRC61Q9BV99 259 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 RBM4Q9BWF3 364 aaKnown RBP14.17□□□□□ -0.14
VCAN-211ENST00000513984 LYARQ9NX58 379 aaKnown RBP14.17□□□□□ -0.14
VCAN-211ENST00000513984 PILRAQ9UKJ1 303 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 ATG4BQ9Y4P1 393 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 SNX11Q9Y5W9 270 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 NINQ8N4C6 2090 aa14.17□□□□□ -0.14
VCAN-211ENST00000513984 DPM1O60762 260 aa14.16□□□□□ -0.14
VCAN-211ENST00000513984 CTSVO60911 334 aa14.16□□□□□ -0.14
VCAN-211ENST00000513984 NDUFS2O75306 463 aa14.16□□□□□ -0.14
VCAN-211ENST00000513984 E2F6O75461 281 aa14.16□□□□□ -0.14
VCAN-211ENST00000513984 AIFM1O95831 613 aa14.16□□□□□ -0.14
VCAN-211ENST00000513984 ALBP02768 609 aa14.16□□□□□ -0.14
VCAN-211ENST00000513984 SLC35G6P0C7Q6 338 aa14.16□□□□□ -0.14
VCAN-211ENST00000513984 JUNDP17535 347 aa14.16□□□□□ -0.14
VCAN-211ENST00000513984 AQP1P29972 269 aa14.16□□□□□ -0.14
VCAN-211ENST00000513984 ITGA1P56199 1179 aa14.16□□□□□ -0.14
VCAN-211ENST00000513984 PCBP3P57721 371 aaKnown RBP14.16□□□□□ -0.14
VCAN-211ENST00000513984 RAB8AP61006 207 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms