RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 KIAA1549Q9HCM3 1950 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 A0A0G2JN53 185 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 URADA6NGE7 173 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 ERN1O75460 977 aaKnown RBP9.64□□□□□ -0.87
CLDND1-227ENST00000513452 F12P00748 615 aaPredicted RBP9.64□□□□□ -0.87
CLDND1-227ENST00000513452 FPR1P21462 350 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 MGAT1P26572 445 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 GDF1P27539 372 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 STIP1P31948 543 aaKnown RBP9.64□□□□□ -0.87
CLDND1-227ENST00000513452 RPL22P35268 128 aaKnown RBP9.64□□□□□ -0.87
CLDND1-227ENST00000513452 SCTRP47872 440 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 PTH2RP49190 550 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 HSD17B7P56937 341 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 RNF4P78317 190 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 DUSP8Q13202 625 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 ACKR1Q16570 336 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 TOR1AIP1Q5JTV8 583 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 NSUN5P2Q63ZY6 315 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 ZNF470Q6ECI4 717 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 KIAA0930Q6ICG6 404 aaPredicted RBP9.64□□□□□ -0.87
CLDND1-227ENST00000513452 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.64□□□□□ -0.87
CLDND1-227ENST00000513452 ANKRD53Q8N9V6 530 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 OR4K1Q8NGD4 311 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 PPP1R14CQ8TAE6 165 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 KCNJ9Q92806 393 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 TSNARE1Q96NA8 513 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 TIMP4Q99727 224 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 KIFC1Q9BW19 673 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 INTS10Q9NVR2 710 aaKnown RBP9.64□□□□□ -0.87
CLDND1-227ENST00000513452 QPCTLQ9NXS2 382 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 BFARQ9NZS9 450 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 KLHL42Q9P2K6 505 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 DHRS7Q9Y394 339 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 TESMINQ9Y4I5 508 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 EML6Q6ZMW3 1958 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 NCKAP5O14513 1909 aa9.64□□□□□ -0.87
CLDND1-227ENST00000513452 CTAGE9A4FU28 777 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 MBD3L3A6NE82 208 aaPredicted RBP9.63□□□□□ -0.87
CLDND1-227ENST00000513452 SIAH2O43255 324 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 LIASO43766 372 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 LRATO95237 230 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 IL18BPO95998 194 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 TMIGD3P0DMS9 266 aaPredicted RBP9.63□□□□□ -0.87
CLDND1-227ENST00000513452 SAT1P21673 171 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 CYLC1P35663 651 aaPredicted RBP9.63□□□□□ -0.87
CLDND1-227ENST00000513452 AHRP35869 848 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 BTN3A2P78410 334 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 ASPHQ12797 758 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 CTBP1Q13363 440 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 RUNX2Q13950 521 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 OASLQ15646 514 aaKnown RBP9.63□□□□□ -0.87
CLDND1-227ENST00000513452 SLC22A10Q63ZE4 541 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 NEPROQ6NW34 567 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 ZNF549Q6P9A3 640 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 CNGA4Q8IV77 575 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 VSTM4Q8IW00 320 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 PM20D2Q8IYS1 436 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 RASGEF1CQ8N431 466 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 CCDC89Q8N998 374 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 MORN4Q8NDC4 146 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 FAM13CQ8NE31 585 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 OR5L2Q8NGL0 311 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 MBD3L2Q8NHZ7 208 aaPredicted RBP9.63□□□□□ -0.87
CLDND1-227ENST00000513452 SLC2A12Q8TD20 617 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 PTPMT1Q8WUK0 201 aaPredicted RBP9.63□□□□□ -0.87
CLDND1-227ENST00000513452 DAZLQ92904 295 aaKnown RBP9.63□□□□□ -0.87
CLDND1-227ENST00000513452 NEIL2Q969S2 332 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 SNF8Q96H20 258 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 RUNDC3BQ96NL0 473 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 OR4K3Q96R72 315 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 GSX2Q9BZM3 304 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 PRDM14Q9GZV8 571 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 AICDAQ9GZX7 198 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 SH2D2AQ9NP31 389 aa9.63□□□□□ -0.87
CLDND1-227ENST00000513452 FBXO6Q9NRD1 293 aaPredicted RBP9.63□□□□□ -0.87
CLDND1-227ENST00000513452 PACSIN2Q9UNF0 486 aaPredicted RBP9.63□□□□□ -0.87
CLDND1-227ENST00000513452 CD8B2A6NJW9 211 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 DEFB108AA8MXU0 73 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 C17orf105B2RV13 164 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 PHF1O43189 567 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-227ENST00000513452 C8GP07360 202 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 ZSCAN5DPP0CG00 497 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 SMIM10L1P0DMW3 83 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 CPOXP36551 454 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 NPY2RP49146 381 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 RAB38P57729 211 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 BASP1P80723 227 aaKnown RBP9.62□□□□□ -0.87
CLDND1-227ENST00000513452 REEP5Q00765 189 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 DHX9Q08211 1270 aaKnown RBP9.62□□□□□ -0.87
CLDND1-227ENST00000513452 FOXF2Q12947 444 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 SNX1Q13596 522 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 CSHL1Q14406 222 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 RBBP5Q15291 538 aaKnown RBP9.62□□□□□ -0.87
CLDND1-227ENST00000513452 SF3B4Q15427 424 aaKnown RBP eCLIP9.62□□□□□ -0.87
CLDND1-227ENST00000513452 SPA17Q15506 151 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 ZNF791Q3KP31 576 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-227ENST00000513452 BBS9Q3SYG4 887 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 C10orf62Q5T681 223 aaPredicted RBP9.62□□□□□ -0.87
CLDND1-227ENST00000513452 HEPHL1Q6MZM0 1159 aa9.62□□□□□ -0.87
CLDND1-227ENST00000513452 C20orf204Q6ZNR8 217 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms