RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 PTGER4P35408 488 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 GCGRP47871 477 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ZNF136P52737 540 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 S100A12P80511 92 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 GALNT1Q10472 559 aaPredicted RBP8.6□□□□□ -1.03
VCAN-208ENST00000512590 MFSD13AQ14CX5 517 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 SLC25A52Q3SY17 297 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 NAIF1Q69YI7 327 aaPredicted RBP8.6□□□□□ -1.03
VCAN-208ENST00000512590 TRIM46Q7Z4K8 759 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 RBM14Q96PK6 669 aaKnown RBP8.6□□□□□ -1.03
VCAN-208ENST00000512590 MICU1Q9BPX6 476 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 EFCAB11Q9BUY7 163 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 GAREM1Q9H706 876 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 DCLRE1BQ9H816 532 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 IGSF9Q9P2J2 1179 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 A0A087WXM4 84 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 C2orf92A0A1B0GVN3 265 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 A0A1W2PPM1 405 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ANKRD63C9JTQ0 380 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 AMY2BP19961 511 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 GABRA3P34903 492 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 PLAURQ03405 335 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 FAAP100Q0VG06 881 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 INTS5Q6P9B9 1019 aaKnown RBP8.6□□□□□ -1.03
VCAN-208ENST00000512590 USP51Q70EK9 711 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 NRROSQ86YC3 692 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 CREG2Q8IUH2 290 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 POU5F2Q8N7G0 328 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ASB12Q8WXK4 309 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 CORO2AQ92828 525 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 NMD3Q96D46 503 aaKnown RBP8.6□□□□□ -1.03
VCAN-208ENST00000512590 ZBTB26Q9HCK0 441 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 MALT1Q9UDY8 824 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 DUSP13Q9UII6 198 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ZNF225Q9UK10 706 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 FBXO4Q9UKT5 387 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 CD163L1Q9NR16 1453 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ANKRD65E5RJM6 399 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ADAMDEC1O15204 470 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 KLRC4O43908 158 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 YIF1AO95070 293 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 SCAF4O95104 1147 aaKnown RBP8.6□□□□□ -1.03
VCAN-208ENST00000512590 SOD2P04179 222 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ANXA7P20073 488 aaKnown RBP8.6□□□□□ -1.03
VCAN-208ENST00000512590 NPR2P20594 1047 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 PSMA1P25786 263 aaKnown RBP8.6□□□□□ -1.03
VCAN-208ENST00000512590 GSK3BP49841 420 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 KCNC4Q03721 635 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 SCARB2Q14108 478 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 RFTN1Q14699 578 aaPredicted RBP8.6□□□□□ -1.03
VCAN-208ENST00000512590 CRB2Q5IJ48 1285 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 WFDC8Q8IUA0 241 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 REXO1L1PQ8IX06 675 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 SLC15A3Q8IY34 581 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 NETO2Q8NC67 525 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ANKS1AQ92625 1134 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 GGHQ92820 318 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 TMEM9BQ9NQ34 198 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 FAIMQ9NVQ4 179 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 MED11Q9P086 117 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 SH2B3Q9UQQ2 575 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 TESMINQ9Y4I5 508 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 VGLL3A8MV65 326 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 K7EPI3 171 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 HTR3BO95264 441 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ZNF728P0DKX0 622 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 PEPDP12955 493 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ATP1B2P14415 290 aaPredicted RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 POLR2JP52435 117 aaKnown RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 GLT8D1Q68CQ7 371 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 CMTM8Q8IZV2 173 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 POGLUT1Q8NBL1 392 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 RAB8BQ92930 207 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 TMEM208Q9BTX3 173 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 NXF5Q9H1B4 397 aaKnown RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 TREM1Q9NP99 234 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ATP13A2Q9NQ11 1180 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 FNIP2Q9P278 1114 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 KLHL9Q9P2J3 617 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ELOVL7A1L3X0 281 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 H3BMQ9 156 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 PAPSS1O43252 624 aaPredicted RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 MTX2O75431 263 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 GJB5O95377 273 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ZBTB11O95625 1053 aaPredicted RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 HNRNPLP14866 589 aaKnown RBP eCLIP8.59□□□□□ -1.031e-9■■■■■ 31.5
VCAN-208ENST00000512590 TACR3P29371 465 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 GNB1P62873 340 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 IL10RBQ08334 325 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 USF2Q15853 346 aaPredicted RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 FAM160A2Q8N612 972 aaPredicted RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 NANPQ8TBE9 248 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 BRIX1Q8TDN6 353 aaKnown RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 PURBQ96QR8 312 aaKnown RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 CYP2S1Q96SQ9 504 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 RBM47A0AV96 593 aaKnown RBP8.59□□□□□ -1.03
VCAN-208ENST00000512590 A8MXE2 369 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 H0YAE9 185 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 J3QLW9 94 aa8.59□□□□□ -1.03
VCAN-208ENST00000512590 ADAP00813 363 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms