RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 STYXQ8WUJ0 223 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 SKA2Q8WVK7 121 aaPredicted RBP8.39□□□□□ -1.07
NUP54-211ENST00000512151 ASB15Q8WXK1 588 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 TBC1D20Q96BZ9 403 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 TM4SF19Q96DZ7 209 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 SCYL1Q96KG9 808 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 MARK4Q96L34 752 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 PRAP1Q96NZ9 151 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 RHOXF2Q9BQY4 288 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 AARSD1Q9BTE6 412 aaKnown RBP8.39□□□□□ -1.07
NUP54-211ENST00000512151 ABCF3Q9NUQ8 709 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 ZNF446Q9NWS9 450 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 RAB21Q9UL25 225 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 YARS2Q9Y2Z4 477 aaKnown RBP8.39□□□□□ -1.07
NUP54-211ENST00000512151 PCDHGB3Q9Y5G1 929 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 MED12Q93074 2177 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 TENM1Q9UKZ4 2725 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 CCDC151A5D8V7 595 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 MROH6A6NGR9 719 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 E7EVH7 732 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 GOLGA8MH3BSY2 632 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 WWP2O00308 870 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 PSMD3O43242 534 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 AVILO75366 819 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 SEC31AO94979 1220 aaKnown RBP8.38□□□□□ -1.07
NUP54-211ENST00000512151 APRTP07741 180 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 IL10P22301 178 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 PPP2R1BP30154 601 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 PIGAP37287 484 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 GUCY2DQ02846 1103 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 VEZF1Q14119 521 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 CLEC12BQ2HXU8 276 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 GLE1Q53GS7 698 aaKnown RBP8.38□□□□□ -1.07
NUP54-211ENST00000512151 WIPI1Q5MNZ9 446 aaPredicted RBP8.38□□□□□ -1.07
NUP54-211ENST00000512151 PLXDC2Q6UX71 529 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 FAM47EQ6ZV65 393 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 LUZP2Q86TE4 346 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 CAND1Q86VP6 1230 aaKnown RBP8.38□□□□□ -1.07
NUP54-211ENST00000512151 GPALPP1Q8IXQ4 340 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 PPIL6Q8IXY8 311 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 C9orf106Q8NAJ2 232 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 B3GNT7Q8NFL0 401 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 OR9A1PQ8NGU1 263 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 NEIL3Q8TAT5 605 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 NCLNQ969V3 563 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 LRRC45Q96CN5 670 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 ZBED6CLQ96FA7 236 aaPredicted RBP8.38□□□□□ -1.07
NUP54-211ENST00000512151 SNF8Q96H20 258 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 WFIKKN1Q96NZ8 548 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 RASL10BQ96S79 203 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 PARD6BQ9BYG5 372 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 ZNF703Q9H7S9 590 aaPredicted RBP8.38□□□□□ -1.07
NUP54-211ENST00000512151 ANKZF1Q9H8Y5 726 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 LRRC40Q9H9A6 602 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 EIF2B3Q9NR50 452 aaKnown RBP8.38□□□□□ -1.07
NUP54-211ENST00000512151 SLC2A6Q9UGQ3 507 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 SH2B3Q9UQQ2 575 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 ATG4BQ9Y4P1 393 aa8.38□□□□□ -1.07
NUP54-211ENST00000512151 KCNE1BA0A087WTH5 132 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 LRRC3CA6NJW4 275 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 AHRRA9YTQ3 701 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 TGFBR3LH3BV60 316 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 MYO1CO00159 1063 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 GPRIN2O60269 458 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 LCMT2O60294 686 aaKnown RBP8.37□□□□□ -1.07
NUP54-211ENST00000512151 BANF1O75531 89 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 MYO1DO94832 1006 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 GOT2P00505 430 aaKnown RBP8.37□□□□□ -1.07
NUP54-211ENST00000512151 EGR1P18146 543 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 ECHS1P30084 290 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 OPRM1P35372 400 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 SOX18P35713 384 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 CCNFP41002 786 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 PNLIPRP1P54315 467 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 CRYZQ08257 329 aaKnown RBP8.37□□□□□ -1.07
NUP54-211ENST00000512151 TMED2Q15363 201 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 MSS51Q4VC12 460 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 DMRTA1Q5VZB9 504 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 NSUN5P2Q63ZY6 315 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 BHLHB9Q6PI77 547 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 RTL4Q6ZR62 310 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 QSOX2Q6ZRP7 698 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 SLC26A11Q86WA9 606 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 LRRC56Q8IYG6 542 aaPredicted RBP8.37□□□□□ -1.07
NUP54-211ENST00000512151 AFAP1L2Q8N4X5 818 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 FBXO15Q8NCQ5 510 aaPredicted RBP8.37□□□□□ -1.07
NUP54-211ENST00000512151 MCUQ8NE86 351 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 OR13J1Q8NGT2 312 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 SERPINB12Q96P63 405 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 PKP4Q99569 1192 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 RAB17Q9H0T7 212 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 LRTM1Q9HBL6 345 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 ZDHHC18Q9NUE0 388 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 KLHL28Q9NXS3 571 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 WHRNQ9P202 907 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 ANAPC5Q9UJX4 755 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 CDC42EP3Q9UKI2 254 aa8.37□□□□□ -1.07
NUP54-211ENST00000512151 PPIEQ9UNP9 301 aaKnown RBP8.37□□□□□ -1.07
NUP54-211ENST00000512151 UTP11Q9Y3A2 253 aaKnown RBP8.37□□□□□ -1.07
NUP54-211ENST00000512151 NINQ8N4C6 2090 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms