RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 A0A1W2PPI3 338 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 CASTOR2A6NHX0 329 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 MKRN2OSH3BPM6 223 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 RANBP6O60518 1105 aaKnown RBP3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 CTSVO60911 334 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 PSMD10O75832 226 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 IGLV2-11P01706 119 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 ATP1A1P05023 1023 aaKnown RBP3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 NR1D1P20393 614 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 GABRA5P31644 462 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 MATR3P43243 847 aaKnown RBP eCLIP3.26□□□□□ -1.892e-6■■□□□ 13.1
TOPBP1-208ENST00000511439 TNFRSF4P43489 277 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 CAPZA2P47755 286 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 DVL1P1P54792 670 aaPredicted RBP3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 EIF3IQ13347 325 aaKnown RBP3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 ALCAMQ13740 583 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 KIR2DS3Q14952 304 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 RASA2Q15283 850 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 KYNUQ16719 465 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 VWA2Q5GFL6 755 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 CCNYL2Q5T2Q4 361 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 NDUFAF5Q5TEU4 345 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 TMEM211Q6ICI0 200 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 ZSCAN25Q6NSZ9 544 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 KLC3Q6P597 504 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 BHLHB9Q6PI77 547 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 FIGLAQ6QHK4 219 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 KRT77Q7Z794 578 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 ITIH5Q86UX2 942 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 EFCAB13Q8IY85 973 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 SLC24A4Q8NFF2 622 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 DMBX1Q8NFW5 382 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 CFAP61Q8NHU2 1237 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 MAPK15Q8TD08 544 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 SPACA9Q96E40 222 aaPredicted RBP3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 C14orf79Q96F83 325 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 PGAP3Q96FM1 320 aaPredicted RBP3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 SCRN2Q96FV2 425 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 ZNF830Q96NB3 372 aaPredicted RBP3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 FOXC2Q99958 501 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 NACAP1Q9BZK3 213 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 CXXC4Q9H2H0 198 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 CPVLQ9H3G5 476 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 GOLPH3LQ9H4A5 285 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 LY9Q9HBG7 655 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 ZNF302Q9NR11 478 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 GDF3Q9NR23 364 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 OLAHQ9NV23 265 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 MIOSQ9NXC5 875 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 TAB2Q9NYJ8 693 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 RHCGQ9UBD6 479 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 CACNG4Q9UBN1 327 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 DDX25Q9UHL0 483 aaKnown RBP3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 CCL26Q9Y258 94 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 ASB3Q9Y575 518 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 TMEM131Q92545 1883 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 PRSS51A0A1B0GVH4 220 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 ELOVL7A1L3X0 281 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 FAM172BPA6NC97 362 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 P2RY10O00398 339 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 IPO8O15397 1037 aaKnown RBP3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 XRCC3O43542 346 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 TSPAN1O60635 241 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 MED24O75448 989 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 SORBS2O94875 1100 aaKnown RBP3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 REC8O95072 547 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 PFKFB1P16118 471 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 CD82P27701 267 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 KIF5BP33176 963 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 PPP5CP53041 499 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 MBTD1Q05BQ5 628 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 KDSRQ06136 332 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 PNRC1Q12796 327 aaPredicted RBP3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 PRKAA1Q13131 559 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 ART3Q13508 389 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 IL11RAQ14626 422 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 RBBP5Q15291 538 aaKnown RBP3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 MRGPRG-AS1Q2M3A8 158 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 KRTAP24-1Q3LI83 254 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 ASPRV1Q53RT3 343 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 GRTP1Q5TC63 336 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 CCDC60Q8IWA6 550 aaPredicted RBP3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 LMNTD1Q8N9Z9 388 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 L3MBTL4Q8NA19 623 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 OR2AJ1Q8NGZ0 328 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 MOSPD2Q8NHP6 518 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 EXD1Q8NHP7 514 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 DAZLQ92904 295 aaKnown RBP3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 PSMG2Q969U7 264 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 CCDC51Q96ER9 411 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 ST6GAL2Q96JF0 529 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 MS4A10Q96PG2 267 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 OLFM1Q99784 485 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 SMR3AQ99954 134 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 NUP58Q9BVL2 599 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 TRIM6Q9C030 488 aaPredicted RBP3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 MMP28Q9H239 520 aa3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 APOBEC3GQ9HC16 384 aaKnown RBP3.25□□□□□ -1.89
TOPBP1-208ENST00000511439 MCCC2Q9HCC0 563 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms