RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TNFSF10P50591 281 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 GABPAQ06546 454 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 LASP1Q14847 261 aaKnown RBP2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 HEPACAMQ14CZ8 416 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 MLF2Q15773 248 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 STX1AQ16623 288 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 ECSCRQ19T08 205 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 MS4A18Q3C1V0 323 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 SLC10A5Q5PT55 438 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 ZNF772Q68DY9 489 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 ETFRF1Q6IPR1 90 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 CAPN13Q6MZZ7 669 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 FAAP20Q6NZ36 180 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 ZNF613Q6PF04 617 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 ZNF730Q6ZMV8 503 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 CYP4V2Q6ZWL3 525 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 ZNF410Q86VK4 478 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 KCNMB4Q86W47 210 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 CACUL1Q86Y37 369 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 STHQ8IWL8 128 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 FBXW8Q8N3Y1 598 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 NEK11Q8NG66 645 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 OR4A16Q8NH70 328 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 SPPL2AQ8TCT8 520 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 GTF3AQ92664 365 aaKnown RBP2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 ZNF689Q96CS4 500 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 PCED1BQ96HM7 432 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 SLC45A3Q96JT2 553 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 ZNF560Q96MR9 790 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 VGLL1Q99990 258 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 CABLES2Q9BTV7 478 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 LRRC61Q9BV99 259 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 THAP9Q9H5L6 903 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 FNDC4Q9H6D8 234 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 ZDHHC6Q9H6R6 413 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 DCLRE1BQ9H816 532 aa2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 FOXA2Q9Y261 457 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 TDRKHQ9Y2W6 561 aaKnown RBP2.85□□□□□ -1.95
TRAPPC11-207ENST00000511409 IGHV4-30-2A0A087WSY4 118 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 IGHV3-20A0A0C4DH32 117 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 SHISA7A6NL88 538 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 CYSRT1A8MQ03 144 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 A8MXK9 166 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 E9PQ18 207 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 RNF103O00237 685 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 PDHXO00330 501 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 SOCS3O14543 225 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 TRAFD1O14545 582 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 KIAA0513O60268 411 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 CSO75390 466 aaKnown RBP2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 PRDM1O75626 825 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 ANXA9O76027 345 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 CPNE6O95741 557 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 CGAP01215 116 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 GPX3P22352 226 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 FCGR2BP31994 310 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 FCGR2CP31995 323 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 ID1P41134 155 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 FHITP49789 147 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 GEMP55040 296 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 FKBP3Q00688 224 aaKnown RBP2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 MS4A2Q01362 244 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 ELAVL2Q12926 359 aaKnown RBP2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 NFATC2Q13469 925 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 PDE7AQ13946 482 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 GK2Q14410 553 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 TRADDQ15628 312 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 UPP1Q16831 310 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 KNOP1Q1ED39 458 aaKnown RBP2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 HFEQ30201 348 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 B3GLCTQ6Y288 498 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 CDHR3Q6ZTQ4 885 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 MCM10Q7L590 875 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 FAM131BQ86XD5 332 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 TBC1D10CQ8IV04 446 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 CNTN4Q8IWV2 1026 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 ARL10Q8N8L6 244 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 C8orf46Q8TAG6 207 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 CHPT1Q8WUD6 406 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 ANKRD27Q96NW4 1050 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 TNFRSF13CQ96RJ3 184 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 SSX3Q99909 188 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 AGPAT1Q99943 283 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 PINK1Q9BXM7 581 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 GFRA4Q9GZZ7 299 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 WWP1Q9H0M0 922 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 TSPYL1Q9H0U9 437 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 PARLQ9H300 379 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 SP140LQ9H930 580 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 DBNDD1Q9H9R9 158 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 WDR41Q9HAD4 459 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 NMUR1Q9HB89 426 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 MIS18AQ9NYP9 233 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 NDUFA13Q9P0J0 144 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 MOSPD1Q9UJG1 213 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 MRTO4Q9UKD2 239 aaKnown RBP2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 KNSTRNQ9Y448 316 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 RNF215Q9Y6U7 377 aa2.84□□□□□ -1.95
TRAPPC11-207ENST00000511409 UMODL1Q5DID0 1318 aa2.84□□□□□ -1.96
TRAPPC11-207ENST00000511409 IGHV3-38A0A0C4DH36 116 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms