RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TRGV8A0A0C4DH27 118 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 TRIM49D1C9J1S8 452 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 FCHO1O14526 889 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 PRKNO60260 465 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 SLC25A12O75746 678 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 SP1P08047 785 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 RHOXF2BP0C7M4 288 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 HOXB1P14653 301 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 TNNI3P19429 210 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 HIST1H1TP22492 207 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 CPN2P22792 545 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 CYB561P49447 251 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 RPS13P62277 151 aaKnown RBP13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 E2F2Q14209 437 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 RCN2Q14257 317 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 TMEM35AQ53FP2 167 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 GLE1Q53GS7 698 aaKnown RBP13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 SLC25A25Q6KCM7 469 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 MAMDC2Q7Z304 686 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 OR4N5Q8IXE1 308 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 LGI4Q8N135 537 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 HORMAD2Q8N7B1 307 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 TMEM178AQ8NBL3 297 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 SRFBP1Q8NEF9 429 aaKnown RBP13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 DNAJB8Q8NHS0 232 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 DCAKDQ8WVC6 231 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 ATP6V1E2Q96A05 226 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 MTFMTQ96DP5 389 aaKnown RBP13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 VMP1Q96GC9 406 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 SCMH1Q96GD3 660 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 RHOXF2Q9BQY4 288 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 CCDC77Q9BR77 488 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 FUT8Q9BYC5 575 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 ALOXE3Q9BYJ1 711 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 ROGDIQ9GZN7 287 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 TSPYL1Q9H0U9 437 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 ADAP2Q9NPF8 381 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 DMRT3Q9NQL9 472 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 RYDENQ9NUL5 291 aaKnown RBP13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 KCMF1Q9P0J7 381 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 XPR1Q9UBH6 696 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 RNF11Q9Y3C5 154 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 CLCA3PQ9Y6N3 262 aa13.81□□□□□ -0.2
UBE2D3-228ENST00000508974 POLEQ07864 2286 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 A0A087WUV0 522 aaPredicted RBP13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 WIPF3A6NGB9 483 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 NPIPA5E9PKD4 350 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 KIF2AO00139 706 aaPredicted RBP13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 PLPP1O14494 284 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 ZNHIT1O43257 154 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 KLK8O60259 260 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 ZG16O60844 167 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 CTNSO60931 367 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 PRKRAO75569 313 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 ITGA10O75578 1167 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 KRT38O76015 456 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 STSP08842 583 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 RFC3P40938 356 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 SERPINB9P50453 376 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 NEK2P51955 445 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 PER3P56645 1201 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 ALDH6A1Q02252 535 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 SLAMF1Q13291 335 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 PCBP2Q15366 365 aaKnown RBP eCLIP13.8□□□□□ -0.29e-8■■■□□ 15.1
UBE2D3-228ENST00000508974 ELAVL1Q15717 326 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 DEPDC1Q5TB30 811 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 OR4C11Q6IEV9 310 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 RPS27LQ71UM5 84 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 ZNF227Q86WZ6 799 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 TMEM156Q8N614 296 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 CPSF7Q8N684 471 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 ZNF321PQ8N8H1 164 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 RGMAQ96B86 450 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 FRMD6Q96NE9 622 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 NSUN5Q96P11 429 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 OR8D2Q9GZM6 311 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 NOL11Q9H8H0 719 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 LYRM4Q9HD34 91 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 NPIPA1Q9UND3 350 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 SPACA6W5XKT8 324 aa13.8□□□□□ -0.2
UBE2D3-228ENST00000508974 EXOC1LA0A1B0GW35 172 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 C17orf105B2RV13 164 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 OR7A17O14581 309 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 NME2P1O60361 137 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 SMIM24O75264 130 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 NME2P22392 152 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 SERPINB1P30740 379 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 MAGEA12P43365 314 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 HLCSP50747 726 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 PHEXP78562 749 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 TERF2Q15554 542 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 ZRSR2Q15696 482 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 TEX35Q5T0J7 233 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 LIPJQ5W064 366 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 FAM219BQ5XKK7 198 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 C18orf63Q68DL7 685 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 ZNF787Q6DD87 383 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 GSPT2Q8IYD1 628 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 CYP4Z2PQ8N1L4 340 aa13.79□□□□□ -0.2
UBE2D3-228ENST00000508974 TMEM132CQ8N3T6 1108 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms