RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 FAM170AA1A519 330 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 KRT87PA6NCN2 255 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 CCDC182A6NF36 153 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF98A6NK75 572 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 GOLGA8SH3BPF8 625 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 SSX5O60225 188 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ACSL4O60488 711 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 PTP4A3O75365 173 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 AKAP3O75969 853 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 KRT34O76011 436 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 IL18RAPO95256 599 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 LDOC1O95751 146 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 LDLRP01130 860 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 IFNA4P05014 189 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ASNSP08243 561 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ENO3P13929 434 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 TCF4P15884 667 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 PDGFRAP16234 1089 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 MATN1P21941 496 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 CRHBPP24387 322 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 GDI2P50395 445 aaKnown RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ATP4BP51164 291 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 CLCNKBP51801 687 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 GBX2P52951 348 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 CDH15P55291 814 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 GPX6P59796 221 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 RAB4BP61018 213 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 RPP38P78345 283 aaKnown RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 CNTN2Q02246 1040 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 RELQ04864 619 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 SCN1BQ07699 218 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 RGS1Q08116 209 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 LGALS3BPQ08380 585 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 CD300CQ08708 224 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 CEACAM7Q14002 265 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 GK3PQ14409 553 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 PIGHQ14442 188 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 INPP5JQ15735 1006 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 PSMD5Q16401 504 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 HADHQ16836 314 aaKnown RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 COL28A1Q2UY09 1125 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ODF3L2Q3SX64 289 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 SBK1Q52WX2 424 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 TOR1AIP1Q5JTV8 583 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ARMC4Q5T2S8 1044 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 METTL11BQ5VVY1 283 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 LCN8Q6JVE9 175 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 RETSATQ6NUM9 610 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ANGPTL8Q6UXH0 198 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ASPGQ86U10 573 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 DNAAF5Q86Y56 855 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 UEVLDQ8IX04 471 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 DDIASQ8IXT1 998 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 SVOPLQ8N434 492 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 CBR4Q8N4T8 237 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 CCNYL1Q8N7R7 359 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 GDPD1Q8N9F7 314 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ANKRD52Q8NB46 1076 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 MCUQ8NE86 351 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 TRPV3Q8NET8 790 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 APPL2Q8NEU8 664 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 BPIFB6Q8NFQ5 453 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 DYNC2LI1Q8TCX1 351 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 TBCKQ8TEA7 893 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC22A17Q8WUG5 538 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC13A3Q8WWT9 602 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 AKAP1Q92667 903 aaKnown RBP eCLIP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 HTRA1Q92743 480 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 GTF2H4Q92759 462 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 SNAPC3Q92966 411 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 USP13Q92995 863 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 PTP4A1Q93096 173 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 NXPE2Q96DL1 559 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ZHX1-C8orf76Q96EF9 292 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 SGTBQ96EQ0 304 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF479Q96JC4 524 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 MSLNLQ96KJ4 702 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 UBXN10Q96LJ8 280 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 MBOAT7Q96N66 472 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 EBF4Q9BQW3 602 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 GATA5Q9BWX5 397 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 FTHL17Q9BXU8 183 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC19A3Q9BZV2 496 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 GPR88Q9GZN0 384 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 LHPPQ9H008 270 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 FAM49AQ9H0Q0 323 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 GAREM1Q9H706 876 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 NOL11Q9H8H0 719 aaKnown RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 COG4Q9H9E3 785 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 IFT46Q9NQC8 304 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 CHST12Q9NRB3 414 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 RGS18Q9NS28 235 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 MED9Q9NWA0 146 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 PAK5Q9P286 719 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC9A2Q9UBY0 812 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 MARCOQ9UEW3 520 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 TRMT112Q9UI30 125 aaKnown RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 STAP1Q9ULZ2 295 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 STUB1Q9UNE7 303 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 ING4Q9UNL4 249 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms