RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 LURAP1Q96LR2 239 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 IL1RAPQ9NPH3 570 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 BCCIPQ9P287 314 aaKnown RBP eCLIP4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 KLK11Q9UBX7 282 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 PIEZO1Q92508 2521 aa4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 COL5A3P25940 1745 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-206ENST00000508524 FER1L5A0AVI2 2057 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 AFDNP55196 1824 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 MAP3K19Q56UN5 1328 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 TTC21AQ8NDW8 1320 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 BDP1A6H8Y1 2624 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 NRXN2Q9P2S2 1712 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 A0A087WWV3 80 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 H3BMM5 538 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 OGTO15294 1046 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 ZNF354AO60765 605 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 DUX4L4P0CJ87 422 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 EPORP19235 508 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 EPHX2P34913 555 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 HSPA4P34932 840 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 ABCE1P61221 599 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 CALD1Q05682 793 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 PRPF4BQ13523 1007 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 SPANXN4Q5MJ08 99 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 KRT80Q6KB66 452 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 REG3GQ6UW15 175 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 OLFM4Q6UX06 510 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 C5orf24Q7Z6I8 188 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 CARM1Q86X55 608 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 CAMKVQ8NCB2 501 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 OR6J1Q8NGC5 347 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 ANKRD2Q9GZV1 360 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 C5AR2Q9P296 337 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 POLKQ9UBT6 870 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 ZNF646O15015 1829 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 SCN4AP35499 1836 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 KTN1Q86UP2 1357 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-206ENST00000508524 USP42Q9H9J4 1324 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 ANKRD31Q8N7Z5 1873 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 IQCMA0A1B0GVH7 501 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 RECQL5O94762 991 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 RGS7P49802 495 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 BTG1P62324 171 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 SIX1Q15475 284 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 FAM174BQ3ZCQ3 159 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 LBHQ53QV2 105 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 FAM166AQ6J272 317 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 C16orf54Q6UWD8 224 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 PRUNE1Q86TP1 453 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 CATSPER3Q86XQ3 398 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 FAM219AQ8IW50 185 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 DND1Q8IYX4 353 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 APCDD1Q8J025 514 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 PRSS35Q8N3Z0 413 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 C4orf32Q8N8J7 132 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 RTL3Q8N8U3 475 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 CSNK1G2-AS1Q8NCQ2 148 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 OR5M9Q8NGP3 310 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 RMDN2Q96LZ7 410 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 IL12RB2Q99665 862 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 SLC25A23Q9BV35 468 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 KATNB1Q9BVA0 655 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 GTPBP2Q9BX10 602 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 SNX25Q9H3E2 840 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 ST6GALNAC4Q9H4F1 302 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 IARS2Q9NSE4 1012 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 ANKEF1Q9NU02 776 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 PLCL2Q9UPR0 1127 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 LIPGQ9Y5X9 500 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 COLEC10Q9Y6Z7 277 aa4.01□□□□□ -1.77
TOPBP1-206ENST00000508524 SLX4Q8IY92 1834 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 PCDH11XQ9BZA7 1347 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 CENPJQ9HC77 1338 aaPredicted RBP4□□□□□ -1.77
TOPBP1-206ENST00000508524 P4HA2O15460 535 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 ZNF749O43361 778 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 PRAF2O60831 178 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 LMO2P25791 158 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 RFC4P35249 363 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 RAD52P43351 418 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 SRPXP78539 464 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 SULT2A1Q06520 285 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 MLF2Q15773 248 aaPredicted RBP4□□□□□ -1.77
TOPBP1-206ENST00000508524 TAZQ16635 292 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 FUT10Q6P4F1 479 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 MOXD1Q6UVY6 613 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 DHRS11Q6UWP2 260 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 NRARPQ7Z6K4 114 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 KCNMB4Q86W47 210 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 PAPOLGQ9BWT3 736 aaKnown RBP4□□□□□ -1.77
TOPBP1-206ENST00000508524 EXOC1Q9NV70 894 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 CACNA1SQ13698 1873 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 INSRP06213 1382 aa4□□□□□ -1.77
TOPBP1-206ENST00000508524 A0A1W2PPW3 197 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 K7EQG2 157 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 TNFSF12O43508 249 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 LUC7L3O95232 432 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 GGPS1O95749 300 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 ERCC2P18074 760 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 GIFP27352 417 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms