RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 GRM7Q14831 915 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 TAF5Q15542 800 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 MEP1AQ16819 746 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ANKDD1AQ495B1 522 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CATSPEREQ5SY80 951 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PRAMEF13Q5VWM6 474 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM26Q6ZUK4 368 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF571Q7Z3V5 609 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 BMP8AQ7Z5Y6 402 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 MTDHQ86UE4 582 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CILP2Q8IUL8 1156 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 IQCKQ8N0W5 287 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 LINC01465Q8N7H1 131 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 GPR151Q8TDV0 419 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 FAM216AQ8WUB2 273 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 GLYATL1Q969I3 302 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 COQ8BQ96D53 544 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 UBXN10Q96LJ8 280 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 KREMEN1Q96MU8 473 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 DMRTA2Q96SC8 542 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PDCD10Q9BUL8 212 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CADM1Q9BY67 442 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SLC25A51Q9H1U9 297 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 CDCP1Q9H5V8 836 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 RDH14Q9HBH5 336 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ETNK1Q9HBU6 452 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 COMMD9Q9P000 198 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 WASF3Q9UPY6 502 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 FARSAQ9Y285 508 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 FEZF1A0PJY2 475 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 K7ESM1 405 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SAP18O00422 153 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 VILLO15195 856 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 UBDO15205 165 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SLC22A1O15245 554 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ASNA1O43681 348 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM127O75204 238 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM63AO94886 807 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZBTB11O95625 1053 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 IL1AP01583 271 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 LPLP06858 475 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PABPC4LP0CB38 370 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 IL7RP16871 459 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ADRA1DP25100 572 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 EPHA8P29322 1005 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 MPIP34949 423 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 STAT5AP42229 794 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ARFIP1P53367 373 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PRKAA2P54646 552 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 EEFSECP57772 596 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 KIAA1024LP59773 190 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 RAB2AP61019 212 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PPP2CBP62714 309 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PPP2CAP67775 309 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 HSD11B2P80365 405 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 VLDLRP98155 873 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ROR2Q01974 943 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 DLG1Q12959 904 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 LINC01559Q495D7 138 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF311Q5JNZ3 666 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 RAET1LQ5VY80 246 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM225Q6GV28 225 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 NADSYN1Q6IA69 706 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM71Q6P5X7 295 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 DNM1P34Q6PK57 102 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 TRAF7Q6Q0C0 670 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 NDUFAF7Q7L592 441 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 C6orf120Q7Z4R8 191 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 GALNTL5Q7Z4T8 443 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PIGWQ7Z7B1 504 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZER1Q7Z7L7 766 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZFAND4Q86XD8 727 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 GALNT4Q8N4A0 578 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ENDOVQ8N8Q3 282 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 OR9K2Q8NGE7 335 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 EEF1AKMT1Q8WVE0 214 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 MUCL1Q96DR8 90 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 DTD2Q96FN9 168 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PEX11GQ96HA9 241 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 PPP3R2Q96LZ3 170 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 KCTD14Q9BQ13 255 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 LRRC61Q9BV99 259 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 BHLHE41Q9C0J9 482 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 OR52A5Q9H2C5 316 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 HIPK2Q9H2X6 1198 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 DSN1Q9H410 356 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 LRRC19Q9H756 370 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SMURF1Q9HCE7 757 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ZFR2Q9UPR6 939 aaKnown RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 AP1M2Q9Y6Q5 423 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 COL5A1P20908 1838 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 SPTBP11277 2137 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 A0A087X0M5 115 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 A0A1B0GX30 115 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 MPPED1O15442 326 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 UGT1A9O60656 530 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 FBXO24O75426 580 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 TMIGD3P0DMS9 266 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-208ENST00000508342 UGT1A6P19224 532 aa2.83□□□□□ -1.96
NEDD4-208ENST00000508342 ITIH1P19827 911 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms