RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 AMER3Q8N944 861 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 ANKRD53Q8N9V6 530 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 DNAJB8Q8NHS0 232 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 ZCCHC10Q8TBK6 192 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 CREB3L4Q8TEY5 395 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 PHF10Q8WUB8 498 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 METTL21AQ8WXB1 218 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 CCDC126Q96EE4 140 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 ARSGQ96EG1 525 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 FAR2Q96K12 515 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 YIPF2Q9BWQ6 316 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 C1QTNF3Q9BXJ4 246 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 ROPN1BQ9BZX4 212 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 RNF32Q9H0A6 362 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 LIME1Q9H400 295 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 SYNPO2LQ9H987 977 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 ROPN1Q9HAT0 212 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 CCM2LQ9NUG4 571 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 RIC8BQ9NVN3 520 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 PSD3Q9NYI0 1048 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 PTGFRNQ9P2B2 879 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 CPSF2Q9P2I0 782 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 DCDC2Q9UHG0 476 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 C3orf18Q9UK00 162 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 PCDHGA11Q9Y5H2 935 aa8.64□□□□□ -1.03
UBE2D3-223ENST00000508249 NBEAL1Q6ZS30 2694 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 LOC102723996A0A087X1L8 192 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 IDSB3KWA1 339 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 H0YIV9 168 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 PSMD12O00232 456 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 RASAL1O95294 804 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 BMP10O95393 424 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 CRYABP02511 175 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 SMIM10L1P0DMW3 83 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 KRT15P19012 456 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 PIK3CBP42338 1070 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 XCR1P46094 333 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 CCT5P48643 541 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 VSNL1P62760 191 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 GTF2H2Q13888 395 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 C18orf21Q32NC0 220 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 CCDC153Q494R4 210 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 GGTA1PQ4G0N0 100 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 GTF2H2CQ6P1K8 395 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 TMEM205Q6UW68 189 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 RIPOR1Q6ZS17 1223 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 CHSY3Q70JA7 882 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 CROCCP2Q86T23 111 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 SPPL2CQ8IUH8 684 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 ZC3H7AQ8IWR0 971 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 PLD6Q8N2A8 252 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 MREGQ8N565 214 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 METTL27Q8N6F8 245 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 TEX9Q8N6V9 391 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 PTGR2Q8N8N7 351 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 L3MBTL4Q8NA19 623 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 KCT2Q8NC54 265 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 ZNF740Q8NDX6 193 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 PLPP5Q8NEB5 264 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 MYRIPQ8NFW9 859 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 OR2L5Q8NG80 312 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 OR9A4Q8NGU2 314 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 OR51Q1Q8NH59 317 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 UTP15Q8TED0 518 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 AENQ8WTP8 325 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 THAP3Q8WTV1 239 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 TBC1D20Q96BZ9 403 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 CMTM7Q96FZ5 175 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 SMIM10Q96HG1 83 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 GPR137Q96N19 417 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 TBCDQ9BTW9 1192 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 NTMT1Q9BV86 223 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 REXO4Q9GZR2 422 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 SPNS1Q9H2V7 528 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 ACTR8Q9H981 624 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 COPS7BQ9H9Q2 264 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 RAB21Q9UL25 225 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 MRPS33Q9Y291 106 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 NAALAD2Q9Y3Q0 740 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 MMACHCQ9Y4U1 282 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 SPACA6W5XKT8 324 aa8.63□□□□□ -1.03
UBE2D3-223ENST00000508249 DYTNA2CJ06 578 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 LRIT2A6NDA9 550 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 CDK2AP1O14519 115 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 B3GALT2O43825 422 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 PRAMEF2O60811 474 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 RDH16O75452 317 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 CLDN9O95484 217 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 OTCP00480 354 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 FHP07954 510 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 RPS17P08708 135 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 ZNF888P0CJ79 500 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 C8orf89P0DMQ9 161 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 ITGAMP11215 1152 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 RNH1P13489 461 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 EPORP19235 508 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 ATP5F1P24539 256 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 HSD17B3P37058 310 aa8.62□□□□□ -1.03
UBE2D3-223ENST00000508249 CCNG1P51959 295 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms