RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 EFNA1P20827 205 aaPredicted RBP16.51■□□□□ 0.23
RNF4-209ENST00000507784 NUDT2P50583 147 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 RASSF2P50749 326 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 RAB38P57729 211 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 SIM1P81133 766 aaPredicted RBP16.51■□□□□ 0.23
RNF4-209ENST00000507784 SHC2P98077 582 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 MAT1AQ00266 395 aaKnown RBP16.51■□□□□ 0.23
RNF4-209ENST00000507784 MC2RQ01718 297 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 TLR1Q15399 786 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 MAPKAPK3Q16644 382 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 ZNF385BQ569K4 471 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 HES3Q5TGS1 186 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 YTHDF3Q7Z739 585 aaKnown RBP16.51■□□□□ 0.23
RNF4-209ENST00000507784 BPHLQ86WA6 291 aaPredicted RBP16.51■□□□□ 0.23
RNF4-209ENST00000507784 DSELQ8IZU8 1212 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 FAM47BQ8NA70 645 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 COL26A1Q96A83 441 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 CLIP3Q96DZ5 547 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 RMND5AQ9H871 391 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 ACTR5Q9H9F9 607 aaPredicted RBP16.51■□□□□ 0.23
RNF4-209ENST00000507784 SLC52A3Q9NQ40 469 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 MS4A12Q9NXJ0 267 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 SLC39A1Q9NY26 324 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 KCMF1Q9P0J7 381 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 C5AR2Q9P296 337 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 SRPK3Q9UPE1 567 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 LOXL2Q9Y4K0 774 aa16.51■□□□□ 0.23
RNF4-209ENST00000507784 CUL9Q8IWT3 2517 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 DNAH14Q0VDD8 3507 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 PGRMC2O15173 223 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 ERAL1O75616 437 aaKnown RBP16.5■□□□□ 0.23
RNF4-209ENST00000507784 CSRP1P21291 193 aaKnown RBP16.5■□□□□ 0.23
RNF4-209ENST00000507784 OR1D4P47884 311 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 MAPK10P53779 464 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 TNFRSF17Q02223 184 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 NFYCQ13952 458 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 IL11RAQ14626 422 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 SYT16Q17RD7 645 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 PRSS53Q2L4Q9 553 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 PAGE3Q5JUK9 113 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 ANXA8L1Q5VT79 327 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 PWWP2BQ6NUJ5 590 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 ANKRD46Q86W74 232 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 VPS37AQ8NEZ2 397 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.5■□□□□ 0.23
RNF4-209ENST00000507784 COQ8BQ96D53 544 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 PEX11GQ96HA9 241 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 CSF3RQ99062 836 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 BHLHE41Q9C0J9 482 aaPredicted RBP16.5■□□□□ 0.23
RNF4-209ENST00000507784 ENAMQ9NRM1 1142 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 UTS2RQ9UKP6 389 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 MUC6Q6W4X9 2439 aa16.5■□□□□ 0.23
RNF4-209ENST00000507784 ASPDHA6ND91 283 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 WASHC1A8K0Z3 465 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 FAM227AF5H4B4 570 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 H0YIG0 161 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 GYG2O15488 501 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 TIAF1O95411 115 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 NTRK1P04629 796 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 HBQ1P09105 142 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 FGF5P12034 268 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 RNH1P13489 461 aaKnown RBP16.49■□□□□ 0.23
RNF4-209ENST00000507784 FBLP22087 321 aaKnown RBP16.49■□□□□ 0.23
RNF4-209ENST00000507784 PTPN4P29074 926 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 NCALDP61601 193 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 PHC1P78364 1004 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 SLC25A3Q00325 362 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 PDE7AQ13946 482 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 C6orf10Q5SRN2 563 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 FAM180BQ6P0A1 224 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 RAB11FIP2Q7L804 512 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 RETREG3Q86VR2 466 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 OR8J2Q8NGG1 315 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 FBXO27Q8NI29 283 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 CIDECQ96AQ7 238 aaPredicted RBP16.49■□□□□ 0.23
RNF4-209ENST00000507784 KLHL29Q96CT2 875 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 ITCHQ96J02 903 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 RBCK1Q9BYM8 510 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 RPF2Q9H7B2 306 aaKnown RBP16.49■□□□□ 0.23
RNF4-209ENST00000507784 ZNF304Q9HCX3 659 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 FBXO8Q9NRD0 319 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 GID8Q9NWU2 228 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 FAM120CQ9NX05 1096 aaKnown RBP16.49■□□□□ 0.23
RNF4-209ENST00000507784 PSME2Q9UL46 239 aa16.49■□□□□ 0.23
RNF4-209ENST00000507784 PCNX2A6NKB5 2137 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 A0A1B0GX78 115 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 PDPK1O15530 556 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 TBX19O60806 448 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 ANP32DO95626 131 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 KRT16P08779 473 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 ITIH1P19827 911 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 GCGRP47871 477 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 NOVA1P51513 510 aaKnown RBP16.48■□□□□ 0.23
RNF4-209ENST00000507784 WNT3P56703 355 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 ARHGAP40Q5TG30 622 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 PRMT9Q6P2P2 845 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 C16orf89Q6UX73 402 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 CAMKMTQ7Z624 323 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 SHISA5Q8N114 240 aa16.48■□□□□ 0.23
RNF4-209ENST00000507784 BMPERQ8N8U9 685 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms