RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 MPP1Q00013 466 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 OCA2Q04671 838 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ILF2Q12905 390 aaKnown RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 FAM53BQ14153 422 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 SPCS2Q15005 226 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 TRIP10Q15642 601 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 HIF1AQ16665 826 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 NADK2Q4G0N4 442 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 COLEC12Q5KU26 742 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 IL23RQ5VWK5 629 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 SUSD1Q6UWL2 747 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 UBE2R2Q712K3 238 aaPredicted RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 COX15Q7KZN9 410 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ANKMY2Q8IV38 441 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 PALM2Q8IXS6 379 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 OR4N4Q8N0Y3 316 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 GALNT11Q8NCW6 608 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ZFP28Q8NHY6 868 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 CPT1CQ8TCG5 803 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 PNPT1Q8TCS8 783 aaKnown RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ADAMTS16Q8TE57 1224 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 EEF1AKMT1Q8WVE0 214 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 RERGQ96A58 199 aaPredicted RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 COL26A1Q96A83 441 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 CERS2Q96G23 380 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 PDLIM5Q96HC4 596 aaKnown RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 THTPAQ9BU02 230 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 CCDC106Q9BWC9 280 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ACAT2Q9BWD1 397 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 OSBPL11Q9BXB4 747 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 MRPL1Q9BYD6 325 aaKnown RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 TGIF2Q9GZN2 237 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ZNF552Q9H707 407 aaPredicted RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 KCNK13Q9HB14 408 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 SLC6A20Q9NP91 592 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 PFDN4Q9NQP4 134 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 GID8Q9NWU2 228 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 QPCTLQ9NXS2 382 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 ZNF282Q9UDV7 671 aaPredicted RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 TRMT6Q9UJA5 497 aaKnown RBP7.61□□□□□ -1.19
SCN1A-207ENST00000507401 DCTN4Q9UJW0 460 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 VWA7Q9Y334 891 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 HEATR5BQ9P2D3 2071 aa7.61□□□□□ -1.19
SCN1A-207ENST00000507401 RP1L1Q8IWN7 2480 aaPredicted RBP7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ELOA3CA0A087WX78 387 aaPredicted RBP7.6□□□□□ -1.19
SCN1A-207ENST00000507401 A0A087WXM4 84 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 A0A1W2PQ72 361 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 KRT87PA6NCN2 255 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ELOA3DA6NLF2 546 aaPredicted RBP7.6□□□□□ -1.19
SCN1A-207ENST00000507401 TRIM64CA6NLI5 447 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 H7BY64 318 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 FBP2O00757 339 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 SOCS6O14544 535 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 GNB5O14775 395 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 SLC22A1O15245 554 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ITM2AO43736 263 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 DNAJA2O60884 412 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 VPS4BO75351 444 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 HIST1H2AGP0C0S8 130 aaPredicted RBP7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ZGLP1P0C6A0 271 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 HIST1H2ADP20671 130 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 GRK2P25098 689 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 GCAP28676 217 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 IMPA1P29218 277 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 SLC26A3P40879 764 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ELK3P41970 407 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ETV4P43268 484 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 SERPINB9P50453 376 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 IL2P60568 153 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ATP6V0D1P61421 351 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 TXNL4AP83876 142 aaKnown RBP7.6□□□□□ -1.19
SCN1A-207ENST00000507401 TIAL1Q01085 375 aaKnown RBP eCLIP7.6□□□□□ -1.19
SCN1A-207ENST00000507401 STX3Q13277 289 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 SP140Q13342 867 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ELOA3BQ3SY89 546 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 BBS9Q3SYG4 887 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 KCTD21Q4G0X4 260 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 PRAMEF13Q5VWM6 474 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ATG9BQ674R7 924 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 TMEM53Q6P2H8 277 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 PAQR3Q6TCH7 311 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 KIRREL2Q6UWL6 708 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 IGFL2Q6UWQ7 119 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 C16orf89Q6UX73 402 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 IGDCC3Q8IVU1 814 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 CPNE9Q8IYJ1 553 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 MYO1HQ8N1T3 1032 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 FBXW8Q8N3Y1 598 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ARHGEF39Q8N4T4 335 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 CSNK1A1LQ8N752 337 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 PACRGLQ8N7B6 248 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 RBMXL3Q8N7X1 1067 aaKnown RBP7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ELOA3Q8NG57 546 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 STT3BQ8TCJ2 826 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 TCP10LQ8TDR4 215 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ACMSDQ8TDX5 336 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 GIPC3Q8TF64 312 aa7.6□□□□□ -1.19
SCN1A-207ENST00000507401 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.6□□□□□ -1.19
SCN1A-207ENST00000507401 SREK1Q8WXA9 508 aaKnown RBP7.6□□□□□ -1.19
SCN1A-207ENST00000507401 HIST1H2AHQ96KK5 128 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms