RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MEX3BQ6ZN04 569 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 CEP128Q6ZU80 1094 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 GPALPP1Q8IXQ4 340 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 ZNF321PQ8N8H1 164 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 OR2M7Q8NG81 312 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 RASL10BQ96S79 203 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 CPNE1Q99829 537 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 SPOCK3Q9BQ16 436 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 ALOXE3Q9BYJ1 711 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 OR8D2Q9GZM6 311 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 DEFB127Q9H1M4 99 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 PRM3Q9NNZ6 103 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 PRDM7Q9NQW5 492 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 MYOTQ9UBF9 498 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 PTBP2Q9UKA9 531 aaKnown RBP10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 ITGB1BP2Q9UKP3 347 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 RNF112Q9ULX5 631 aa10.72□□□□□ -0.69
HMGCS1-204ENST00000507293 TCRBV9S1A1TA0A576 114 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 FAM159BA6NKW6 160 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 C17orf105B2RV13 164 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 G3V3Y1 287 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 ACOT7O00154 380 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 RTCAO00442 366 aaKnown RBP10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 NCKAP5O14513 1909 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 FANCGO15287 622 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 LDB3O75112 727 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 DNAJC13O75165 2243 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 TNNI3P19429 210 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 KCNC1P48547 511 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 RAB10P61026 200 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 PPIAP62937 165 aaKnown RBP10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 ID2Q02363 134 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 STX4Q12846 297 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 CALCOCO2Q13137 446 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 LAPTM5Q13571 262 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 EFTUD2Q15029 972 aaKnown RBP eCLIP10.71□□□□□ -0.695e-14■■■□□ 18.9
HMGCS1-204ENST00000507293 ZKSCAN8Q15776 578 aaPredicted RBP10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 HIST2H2ACQ16777 129 aaPredicted RBP10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 HIST2H2AA3Q6FI13 130 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 ARHGAP11AQ6P4F7 1023 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 ZNF793Q6ZN11 406 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 LRRC70Q7Z2Q7 622 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 UBE3DQ7Z6J8 389 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 ACBD4Q8NC06 268 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 MORN4Q8NDC4 146 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 OR14A16Q8NHC5 309 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 SLC2A12Q8TD20 617 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 ZNF473Q8WTR7 871 aaKnown RBP10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 PTPMT1Q8WUK0 201 aaPredicted RBP10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 CHTF18Q8WVB6 975 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 DAZLQ92904 295 aaKnown RBP10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 KIAA1191Q96A73 305 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 C14orf79Q96F83 325 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 KCNC2Q96PR1 638 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 MAPKAP1Q9BPZ7 522 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 MS4A8Q9BY19 250 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 ROGDIQ9GZN7 287 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 ENKD1Q9H0I2 346 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 TP63Q9H3D4 680 aaPredicted RBP10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 LYRM4Q9HD34 91 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 WHRNQ9P202 907 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 VTI1BQ9UEU0 232 aa10.71□□□□□ -0.69
HMGCS1-204ENST00000507293 FAM187AA6NFU0 413 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 FAM90A27PA6NNH2 459 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 SUPT3HB4E1H0 165 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 EIF3HO15372 352 aaKnown RBP eCLIP10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 SH3BGRLO75368 114 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 SUPT3HO75486 399 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 C1QAP02745 245 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 PCNAP12004 261 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 ATP5A1P25705 553 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 GPX6P59796 221 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 RNF4P78317 190 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 TLE4Q04727 773 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 DLG1Q12959 904 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 SERTAD2Q14140 314 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 SLMAPQ14BN4 828 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 TBCCQ15814 346 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 ZNF750Q32MQ0 723 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 TMEM211Q6ICI0 200 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 PAOXQ6QHF9 649 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 RTL4Q6ZR62 310 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 CMC1Q7Z7K0 106 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 CTAGE3PQ8IX95 158 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 RPRMLQ8N4K4 120 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 ACOT4Q8N9L9 421 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 SRFBP1Q8NEF9 429 aaKnown RBP10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 ASB5Q8WWX0 329 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 SCYL1Q96KG9 808 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 UBXN10Q96LJ8 280 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 ERP44Q9BS26 406 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 TBCDQ9BTW9 1192 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 TTTY12Q9BZ98 90 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 CD244Q9BZW8 370 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 ALG9Q9H6U8 611 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 GRHL1Q9NZI5 618 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 NUDT4Q9NZJ9 180 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 RNF14Q9UBS8 474 aa10.7□□□□□ -0.7
HMGCS1-204ENST00000507293 RNF6Q9Y252 685 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms