RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SLC6A18Q96N87 628 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 P2RY13Q9BPV8 354 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 MARVELD1Q9BSK0 173 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 PPP1R3EQ9H7J1 279 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 WDR70Q9NW82 654 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 MRPL39Q9NYK5 338 aaKnown RBP16.96■□□□□ 0.31
NUP54-205ENST00000507257 AFF4Q9UHB7 1163 aaKnown RBP16.96■□□□□ 0.31
NUP54-205ENST00000507257 FCF1Q9Y324 198 aaKnown RBP16.96■□□□□ 0.31
NUP54-205ENST00000507257 ALG5Q9Y673 324 aa16.96■□□□□ 0.31
NUP54-205ENST00000507257 LINC00854A0A1B0GVQ3 168 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 MGAT4DA6NG13 374 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 ZSCAN5BA6NJL1 495 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 MYL12BO14950 172 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 KPNA5O15131 536 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 AKR1A1P14550 325 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 ITPKAP23677 461 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 TIA1P31483 386 aaKnown RBP eCLIP16.96■□□□□ 0.3
NUP54-205ENST00000507257 SDC2P34741 201 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 RPL3P39023 403 aaKnown RBP16.96■□□□□ 0.3
NUP54-205ENST00000507257 HOXC5Q00444 222 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 PLK5Q496M5 336 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 PYDC2Q56P42 97 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 FAM26DQ5JW98 314 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 ZNF782Q6ZMW2 699 aaPredicted RBP16.96■□□□□ 0.3
NUP54-205ENST00000507257 DCAF4L2Q8NA75 395 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 CDC26Q8NHZ8 85 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 CLIP3Q96DZ5 547 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 NELL2Q99435 816 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 SLC35A5Q9BS91 424 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 REEP4Q9H6H4 257 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 TMCC3Q9ULS5 477 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 ANGPT4Q9Y264 503 aa16.96■□□□□ 0.3
NUP54-205ENST00000507257 C2orf78A6NCI8 922 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 C12orf71A8MTZ7 269 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 NOS1APO75052 506 aaPredicted RBP16.95■□□□□ 0.3
NUP54-205ENST00000507257 GJB5O95377 273 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 RECKO95980 971 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 PRKAR1AP10644 381 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 SRCP12931 536 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 PNLIPRP1P54315 467 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 HBA1P69905 142 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 RIPPLY1Q0D2K3 151 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 ANGPT1Q15389 498 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 XKR6Q5GH73 641 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 HECTD3Q5T447 861 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 ZNF648Q5T619 568 aaPredicted RBP16.95■□□□□ 0.3
NUP54-205ENST00000507257 LAMTOR1Q6IAA8 161 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 ZNF730Q6ZMV8 503 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 C16orf59Q7L2K0 433 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 TAGAPQ8N103 731 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 NLGN4YQ8NFZ3 816 aaPredicted RBP16.95■□□□□ 0.3
NUP54-205ENST00000507257 OR4M1Q8NGD0 313 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.95■□□□□ 0.3
NUP54-205ENST00000507257 APOBEC4Q8WW27 367 aaKnown RBP16.95■□□□□ 0.3
NUP54-205ENST00000507257 CLP1Q92989 425 aaKnown RBP16.95■□□□□ 0.3
NUP54-205ENST00000507257 BHMTQ93088 406 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 BEX2Q9BXY8 128 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 RC3H2Q9HBD1 1191 aaKnown RBP16.95■□□□□ 0.3
NUP54-205ENST00000507257 PAK6Q9NQU5 681 aaPredicted RBP16.95■□□□□ 0.3
NUP54-205ENST00000507257 HCN2Q9UL51 889 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 EXO1Q9UQ84 846 aaKnown RBP16.95■□□□□ 0.3
NUP54-205ENST00000507257 KIAA1671Q9BY89 1806 aa16.95■□□□□ 0.3
NUP54-205ENST00000507257 TRBC2A0A5B9 178 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 UPK3BL1B0FP48 263 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 UPK3BL2E5RIL1 263 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 PLD2O14939 933 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 CSF2P04141 144 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 SLC10A3P09131 477 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 FGF9P31371 208 aaPredicted RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 STK19P49842 368 aaPredicted RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 WDR5P61964 334 aaKnown RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 RRAS2P62070 204 aaPredicted RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 ALDH6A1Q02252 535 aaKnown RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 MAB21L1Q13394 359 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 PDE7AQ13946 482 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 DOC2AQ14183 400 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 CCL14Q16627 93 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 BTBD16Q32M84 506 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 CLLU1OSQ5K130 101 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 CASP12Q6UXS9 341 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 FAM26EQ8N5C1 309 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 CAMKK1Q8N5S9 505 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 GPR26Q8NDV2 337 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 C19orf18Q8NEA5 215 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 ANKK1Q8NFD2 765 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 TMEM163Q8TC26 289 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 ALG14Q96F25 216 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 HYLS1Q96M11 299 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 IL4I1Q96RQ9 567 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 MTERF1Q99551 399 aaKnown RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 TMPRSS11EQ9UL52 423 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 NOD1Q9Y239 953 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 PRG3Q9Y2Y8 225 aaPredicted RBP16.94■□□□□ 0.3
NUP54-205ENST00000507257 A0A1W2PQ67 120 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 ZNF840PA6NDX5 716 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 SGK494L7N484 410 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 COCHO43405 550 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 LATS1O95835 1130 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 MYL12AP19105 171 aa16.94■□□□□ 0.3
NUP54-205ENST00000507257 TGM4P49221 684 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms