RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 RNH1P13489 461 aaKnown RBP13.38□□□□□ -0.27
RNF4-208ENST00000507247 SPINK2P20155 84 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 SLC5A2P31639 672 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 XCR1P46094 333 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 ASMTP46597 345 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 C21orf58P58505 322 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 STX1BP61266 288 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 DCDP81605 110 aaKnown RBP13.38□□□□□ -0.27
RNF4-208ENST00000507247 ABHD18Q0P651 414 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 ERV3-1Q14264 604 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 RPS6KA2Q15349 733 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 UGT8Q16880 541 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 PRSS53Q2L4Q9 553 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 NKAIN1Q4KMZ8 207 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 TMEM164Q5U3C3 297 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 FAM198BQ6UWH4 519 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 RIMKLAQ8IXN7 391 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 MIER2Q8N344 545 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 DPY30Q9C005 99 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 B3GNT4Q9C0J1 378 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 CLK4Q9HAZ1 481 aaKnown RBP13.38□□□□□ -0.27
RNF4-208ENST00000507247 ASCL3Q9NQ33 180 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 ZIM2Q9NZV7 527 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 ARMCX1Q9P291 453 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 C5AR2Q9P296 337 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 TRPC4Q9UBN4 977 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 CTSFQ9UBX1 484 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 PCDHA9Q9Y5H5 950 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 GLOD5A6NK44 160 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 SCAMP2O15127 329 aaKnown RBP13.37□□□□□ -0.27
RNF4-208ENST00000507247 PGRMC2O15173 223 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 CCDC22O60826 627 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 CNOT3O75175 753 aaKnown RBP13.37□□□□□ -0.27
RNF4-208ENST00000507247 GUCY1B2O75343 617 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 JRKO75564 520 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 FURINP09958 794 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 DDCP20711 480 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 JAK1P23458 1154 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 BUD31P41223 144 aaPredicted RBP13.37□□□□□ -0.27
RNF4-208ENST00000507247 ALDH9A1P49189 494 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 FOXL2P58012 376 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 KLF10Q13118 480 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 PDE7AQ13946 482 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 ZNF385BQ569K4 471 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 ANKRD26P1Q6NSI1 321 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 FAM199XQ6PEV8 388 aaPredicted RBP13.37□□□□□ -0.27
RNF4-208ENST00000507247 IGF2-ASQ6U949 168 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 ZNF517Q6ZMY9 492 aaPredicted RBP13.37□□□□□ -0.27
RNF4-208ENST00000507247 IKBIPQ70UQ0 350 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 FUNDC1Q8IVP5 155 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 TMEM151BQ8IW70 566 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 ZC3H7AQ8IWR0 971 aaKnown RBP13.37□□□□□ -0.27
RNF4-208ENST00000507247 OR7A2PQ8NGA2 310 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 MR1Q95460 341 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 CCDC106Q9BWC9 280 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 YIPF2Q9BWQ6 316 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 NRSN2Q9GZP1 204 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 CHST8Q9H2A9 424 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 CLMPQ9H6B4 373 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 REEP4Q9H6H4 257 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 LANCL2Q9NS86 450 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 MS4A12Q9NXJ0 267 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.37□□□□□ -0.27
RNF4-208ENST00000507247 WBP11Q9Y2W2 641 aaKnown RBP13.37□□□□□ -0.27
RNF4-208ENST00000507247 PCDHGA7Q9Y5G6 932 aa13.37□□□□□ -0.27
RNF4-208ENST00000507247 IGLV3-12A0A075B6K2 115 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 C1orf226A1L170 272 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 GABRR3A8MPY1 467 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 PSMD12O00232 456 aaPredicted RBP13.36□□□□□ -0.27
RNF4-208ENST00000507247 PRMT3O60678 531 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 SLC22A3O75751 556 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 CDC123O75794 336 aaPredicted RBP13.36□□□□□ -0.27
RNF4-208ENST00000507247 DCTN3O75935 186 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 BMP10O95393 424 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 KLK3P07288 261 aaPredicted RBP13.36□□□□□ -0.27
RNF4-208ENST00000507247 PIM1P11309 404 aaPredicted RBP13.36□□□□□ -0.27
RNF4-208ENST00000507247 PRPS1L1P21108 318 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 AGXTP21549 392 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 PIK3R1P27986 724 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 RBMS1P29558 406 aaKnown RBP13.36□□□□□ -0.27
RNF4-208ENST00000507247 EFNA3P52797 238 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 IRX1P78414 480 aaPredicted RBP13.36□□□□□ -0.27
RNF4-208ENST00000507247 HEPACAMQ14CZ8 416 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 RTP5Q14D33 572 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 TERF2Q15554 542 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 AGKQ53H12 422 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 VWA2Q5GFL6 755 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 C6orf15Q6UXA7 325 aaPredicted RBP13.36□□□□□ -0.27
RNF4-208ENST00000507247 GK5Q6ZS86 529 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 TREML1Q86YW5 311 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 TICAM1Q8IUC6 712 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 FAM9CQ8IZT9 166 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 DNAJB14Q8TBM8 379 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 ADAMTS18Q8TE60 1221 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 TESCQ96BS2 214 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 TBC1D20Q96BZ9 403 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 ERP27Q96DN0 273 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 DPH2Q9BQC3 489 aaPredicted RBP13.36□□□□□ -0.27
RNF4-208ENST00000507247 SCNM1Q9BWG6 230 aa13.36□□□□□ -0.27
RNF4-208ENST00000507247 FAIM2Q9BWQ8 316 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms