RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 ATG14Q6ZNE5 492 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 ZNF595Q8IYB9 648 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 ZCCHC7Q8N3Z6 543 aaKnown RBP16.7■□□□□ 0.26
SMN1-204ENST00000506163 ARMC2Q8NEN0 867 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 ANKRD9Q96BM1 317 aaPredicted RBP16.7■□□□□ 0.26
SMN1-204ENST00000506163 APOPT1Q96IL0 206 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 SERPINI1Q99574 410 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 LPAR4Q99677 370 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 MRPL1Q9BYD6 325 aaKnown RBP16.7■□□□□ 0.26
SMN1-204ENST00000506163 CTNSO60931 367 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 LDB3O75112 727 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 ICAM2P13598 275 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 TSFMP43897 325 aaKnown RBP16.7■□□□□ 0.26
SMN1-204ENST00000506163 HTR6P50406 440 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 ARFIP1P53367 373 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 MLLT10P55197 1068 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 FOXA1P55317 472 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 PHEXP78562 749 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 ID2Q02363 134 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 TLE1Q04724 770 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 LCP2Q13094 533 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 SLC13A2Q13183 592 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 MFAP5Q13361 173 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 PCLAFQ15004 111 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 FCRLBQ6BAA4 426 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 H3F3CQ6NXT2 135 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 C10orf107Q8IVU9 208 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 KIF2BQ8N4N8 673 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 CATSPER1Q8NEC5 780 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 MYRIPQ8NFW9 859 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 M1APQ8TC57 530 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 AGAP11Q8TF27 550 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 SELENOMQ8WWX9 145 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 ZIM3Q96PE6 472 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 LMF1Q96S06 567 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 ELOVL6Q9H5J4 265 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 MMP25Q9NPA2 562 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 PLA2G3Q9NZ20 509 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 TIMM22Q9Y584 194 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 GCN1Q92616 2671 aaKnown RBP16.69■□□□□ 0.26
SMN1-204ENST00000506163 A0A1W2PR48 441 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 CLDN4O14493 209 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 PROM1O43490 865 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 MLYCDO95822 493 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 TUBBP07437 444 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 CPN2P22792 545 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 TPP2P29144 1249 aaPredicted RBP16.69■□□□□ 0.26
SMN1-204ENST00000506163 ST13P50502 369 aaKnown RBP16.69■□□□□ 0.26
SMN1-204ENST00000506163 GALNT1Q10472 559 aaPredicted RBP16.69■□□□□ 0.26
SMN1-204ENST00000506163 TBL3Q12788 808 aaKnown RBP16.69■□□□□ 0.26
SMN1-204ENST00000506163 KRT71Q3SY84 523 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 PRR30Q53SZ7 412 aaPredicted RBP16.69■□□□□ 0.26
SMN1-204ENST00000506163 CRB2Q5IJ48 1285 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 IRAK1BP1Q5VVH5 260 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 Q6ZS92 163 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 CUZD1Q86UP6 607 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 GPR180Q86V85 440 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 HPS6Q86YV9 775 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 OR4N5Q8IXE1 308 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 CCDC63Q8NA47 563 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 RDH11Q8TC12 318 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 TCP10LQ8TDR4 215 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 ELP5Q8TE02 316 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 ADAMTS18Q8TE60 1221 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 CCDC126Q96EE4 140 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 MAGEB10Q96LZ2 347 aaPredicted RBP16.69■□□□□ 0.26
SMN1-204ENST00000506163 FAM111AQ96PZ2 611 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 MID1IP1Q9NPA3 183 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 PNO1Q9NRX1 252 aaKnown RBP16.69■□□□□ 0.26
SMN1-204ENST00000506163 SNX6Q9UNH7 406 aa16.69■□□□□ 0.26
SMN1-204ENST00000506163 SAGE2PA6NJ88 616 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 A8MUI8 341 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 TYROBPO43914 113 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 FGF17O60258 216 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 KLHL41O60662 606 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 SEMA3DO95025 777 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 ESRRBO95718 433 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 F10P00742 488 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 KLK1P06870 262 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 GPR143P51810 404 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 IGFBP7Q16270 282 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 EXT1Q16394 746 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 TNFAIP8L3Q5GJ75 292 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 C10orf62Q5T681 223 aaPredicted RBP16.68■□□□□ 0.26
SMN1-204ENST00000506163 FRMD7Q6ZUT3 714 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 METTL4Q8N3J2 472 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 ZADH2Q8N4Q0 377 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 EFCAB3Q8N7B9 438 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 METTL6Q8TCB7 284 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 PNPLA2Q96AD5 504 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 CENPKQ9BS16 269 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 MECRQ9BV79 373 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 GATA5Q9BWX5 397 aaPredicted RBP16.68■□□□□ 0.26
SMN1-204ENST00000506163 ALOXE3Q9BYJ1 711 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 SLC29A3Q9BZD2 475 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 SLC12A4Q9UP95 1085 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 MRPS33Q9Y291 106 aaKnown RBP16.68■□□□□ 0.26
SMN1-204ENST00000506163 B3GNT3Q9Y2A9 372 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 CPAMD8Q8IZJ3 1885 aa16.68■□□□□ 0.26
SMN1-204ENST00000506163 GLOD5A6NK44 160 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms