RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 EIF3BP55884 814 aaKnown RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 KCNJ2P63252 427 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 RELAQ04206 551 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 BSPH1Q075Z2 132 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 HYAL2Q12891 473 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 MSLNQ13421 630 aaPredicted RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 RCAN2Q14206 197 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 RAB35Q15286 201 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 TERF2Q15554 542 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 CYP1B1Q16678 543 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 AGAP6Q5VW22 663 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 ZDHHC20Q5W0Z9 365 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 DENND5AQ6IQ26 1287 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 CAVIN1Q6NZI2 390 aaKnown RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 B3GLCTQ6Y288 498 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 QSOX2Q6ZRP7 698 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 MON1BQ7L1V2 547 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 LRRC49Q8IUZ0 686 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 PSTKQ8IV42 348 aaKnown RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 CYP4X1Q8N118 509 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 PIP4P2Q8N4L2 257 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 AFAP1L2Q8N4X5 818 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 CLDN19Q8N6F1 224 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF321PQ8N8H1 164 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 KCT2Q8NC54 265 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 OR6P1Q8NGX9 317 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 SPATA22Q8NHS9 363 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 MAGEC3Q8TD91 643 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 NSMCE1Q8WV22 266 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 SREK1Q8WXA9 508 aaKnown RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 HPS1Q92902 700 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 UCN3Q969E3 161 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 ABTB1Q969K4 478 aaPredicted RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 UBE2FQ969M7 185 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 ZBTB8AQ96BR9 441 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 TBC1D20Q96BZ9 403 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 VMP1Q96GC9 406 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 TEKT5Q96M29 485 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 MCEEQ96PE7 176 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 HBEGFQ99075 208 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 MACROD1Q9BQ69 325 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 SLC39A3Q9BRY0 314 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 PIMREGQ9BSJ6 248 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 ANP32EQ9BTT0 268 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 ACTR6Q9GZN1 396 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 CISD1Q9NZ45 108 aaKnown RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 PCSK1NQ9UHG2 260 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 RNF112Q9ULX5 631 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 BOKQ9UMX3 212 aaPredicted RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 PCDHGB5Q9Y5G0 923 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 GOLGA8QA0A0J9YX86 632 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 LOC390937A0A1W2PQ73 354 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 ANKRD62A6NC57 917 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 GOLGA8OA6NCC3 632 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 SMTNL1A8MU46 457 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 LGALS16A8MUM7 142 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 GOLGA8NF8WBI6 632 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 CCDC188H7C350 402 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 GOLGA8RI6L899 631 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 KCNK1O00180 336 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 PLOD2O00469 737 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 TIMM23O14925 209 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 HAT1O14929 419 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 PHF2O75151 1096 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 ZFAND5O76080 213 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 ACTL6AO96019 429 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 B3GALT4O96024 378 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 RNASE1P07998 156 aaKnown RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 GSTM1P09488 218 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 TPM1P09493 284 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 CCDC172P0C7W6 258 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 PRSS56P0CW18 603 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 ERGP11308 486 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 SELEP16581 610 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 PSMB1P20618 241 aaKnown RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 CDK11BP21127 795 aaKnown RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 IL10P22301 178 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 OMGP23515 440 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 CHMP24386 653 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 CCNCP24863 283 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 GIFP27352 417 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 APEX1P27695 318 aaKnown RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 LHX2P50458 406 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF135P52742 658 aaPredicted RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 GFRA1P56159 465 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 CLDN15P56746 228 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 CLDN18P56856 261 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 BPIFB4P59827 614 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 SIRPAP78324 504 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 RELBQ01201 579 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 MEF2AQ02078 507 aaPredicted RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 GSTM4Q03013 218 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 MAP4K2Q12851 820 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 SLC10A2Q12908 348 aaPredicted RBP2.97□□□□□ -1.93
TCOF1-208ENST00000506063 NAA25Q14CX7 972 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 BRD3Q15059 726 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 P2RY6Q15077 328 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 NFKBIBQ15653 356 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 TAB1Q15750 504 aa2.97□□□□□ -1.93
TCOF1-208ENST00000506063 HSP90AA4PQ58FG1 418 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms