RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 OR7G3Q8NG95 312 aa11.15□□□□□ -0.62
MED28-203ENST00000503945 ZNF473Q8WTR7 871 aaKnown RBP11.15□□□□□ -0.62
MED28-203ENST00000503945 ITLN2Q8WWU7 325 aaPredicted RBP11.15□□□□□ -0.62
MED28-203ENST00000503945 NCLNQ969V3 563 aa11.15□□□□□ -0.62
MED28-203ENST00000503945 RBM18Q96H35 190 aaKnown RBP11.15□□□□□ -0.62
MED28-203ENST00000503945 MAGED4Q96JG8 741 aa11.15□□□□□ -0.62
MED28-203ENST00000503945 ATOH8Q96SQ7 321 aa11.15□□□□□ -0.62
MED28-203ENST00000503945 CENPKQ9BS16 269 aa11.15□□□□□ -0.62
MED28-203ENST00000503945 ADAP2Q9NPF8 381 aa11.15□□□□□ -0.62
MED28-203ENST00000503945 KCMF1Q9P0J7 381 aa11.15□□□□□ -0.62
MED28-203ENST00000503945 SH3BGRL2Q9UJC5 107 aa11.15□□□□□ -0.62
MED28-203ENST00000503945 ERVK-11Q9UQG0 969 aa11.15□□□□□ -0.62
MED28-203ENST00000503945 KLF13Q9Y2Y9 288 aaPredicted RBP11.15□□□□□ -0.62
MED28-203ENST00000503945 TNPO3Q9Y5L0 923 aaKnown RBP11.15□□□□□ -0.62
MED28-203ENST00000503945 PKDREJQ9NTG1 2253 aa11.15□□□□□ -0.62
MED28-203ENST00000503945 OTOGQ6ZRI0 2925 aa11.15□□□□□ -0.63
MED28-203ENST00000503945 CPAMD8Q8IZJ3 1885 aa11.15□□□□□ -0.63
MED28-203ENST00000503945 SCN2AQ99250 2005 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 POLQO75417 2590 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 A0A096LPK6 155 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 NME2P1O60361 137 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 SH3BGRLO75368 114 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 ITGA10O75578 1167 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 KLHL2O95198 593 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 GFAPP14136 432 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 EPORP19235 508 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 CD22P20273 847 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 NME2P22392 152 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 CPN2P22792 545 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 PTX3P26022 381 aaPredicted RBP11.14□□□□□ -0.63
MED28-203ENST00000503945 TLX1P31314 330 aaPredicted RBP11.14□□□□□ -0.63
MED28-203ENST00000503945 GMPRP36959 345 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 GPR143P51810 404 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 ALDH18A1P54886 795 aaKnown RBP11.14□□□□□ -0.63
MED28-203ENST00000503945 SLAMF1Q13291 335 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 WHAMMP3Q1A5X7 153 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 DEPDC1Q5TB30 811 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 KHDRBS2Q5VWX1 349 aaKnown RBP11.14□□□□□ -0.63
MED28-203ENST00000503945 LIPJQ5W064 366 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 OR4C11Q6IEV9 310 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 ADNP2Q6IQ32 1131 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 HSDL2Q6YN16 418 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 UBE3DQ7Z6J8 389 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 MYLK4Q86YV6 388 aaPredicted RBP11.14□□□□□ -0.63
MED28-203ENST00000503945 SULF2Q8IWU5 870 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 GHDCQ8N2G8 530 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 POGLUT1Q8NBL1 392 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 MORN4Q8NDC4 146 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 TMEM52Q8NDY8 209 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 OR5L2Q8NGL0 311 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 IFT81Q8WYA0 676 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 ZNF592Q92610 1267 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 RGMAQ96B86 450 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 REPS1Q96D71 796 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 MS4A8Q9BY19 250 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 TSPAN10Q9H1Z9 355 aaPredicted RBP11.14□□□□□ -0.63
MED28-203ENST00000503945 ACTR8Q9H981 624 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 TIMMDC1Q9NPL8 285 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 ZDHHC18Q9NUE0 388 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 MS4A12Q9NXJ0 267 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 ASB1Q9Y576 335 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 PCDHGA11Q9Y5H2 935 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 IKBKGQ9Y6K9 419 aa11.14□□□□□ -0.63
MED28-203ENST00000503945 MYOCOSA0A1B0GUC4 107 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 SAP18O00422 153 aaKnown RBP11.13□□□□□ -0.63
MED28-203ENST00000503945 DYRK3O43781 588 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 PEX1O43933 1283 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 SNRPB2P08579 225 aaKnown RBP11.13□□□□□ -0.63
MED28-203ENST00000503945 MTHFD2P13995 350 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 ABOP16442 354 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 ZNF24P17028 368 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 HIST1H1TP22492 207 aaPredicted RBP11.13□□□□□ -0.63
MED28-203ENST00000503945 PPP2R1BP30154 601 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 PIK3CBP42338 1070 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 SSR4P51571 173 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 HNRNPFP52597 415 aaKnown RBP11.13□□□□□ -0.63
MED28-203ENST00000503945 SMSP52788 366 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 PHEXP78562 749 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 E2F2Q14209 437 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 RPTNQ6XPR3 784 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 ZNF227Q86WZ6 799 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 RELL1Q8IUW5 271 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 ZNF808Q8N4W9 903 aaPredicted RBP11.13□□□□□ -0.63
MED28-203ENST00000503945 CPSF7Q8N684 471 aaKnown RBP11.13□□□□□ -0.63
MED28-203ENST00000503945 MNS1Q8NEH6 495 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 OR14A16Q8NHC5 309 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 PTPMT1Q8WUK0 201 aaPredicted RBP11.13□□□□□ -0.63
MED28-203ENST00000503945 UBTD2Q8WUN7 234 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 KCTD4Q8WVF5 259 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 TANKQ92844 425 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 ATP6V1E2Q96A05 226 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 CCDC120Q96HB5 630 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 FRMD6Q96NE9 622 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 MAPKAP1Q9BPZ7 522 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 OR8D2Q9GZM6 311 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 OR51B5Q9H339 312 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 IPPKQ9H8X2 491 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 CHST11Q9NPF2 352 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 SNX15Q9NRS6 342 aa11.13□□□□□ -0.63
MED28-203ENST00000503945 MYOTQ9UBF9 498 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms