RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 PSD4Q8NDX1 1056 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 CCDC115Q96NT0 180 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 OR2M4Q96R27 311 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 CHMP1AQ9HD42 196 aaPredicted RBP15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 ENAMQ9NRM1 1142 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 SH3PXD2BA1X283 911 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 OR2AT4A6NND4 320 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 PROM1O43490 865 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 SLC19A2O60779 497 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 RFPL2O75678 378 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 GGT1P19440 569 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 NPRL3Q12980 569 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 FAM189A2Q15884 450 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 WDR45BQ5MNZ6 344 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 SGIP1Q9BQI5 828 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 TIGARQ9NQ88 270 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 HCN3Q9P1Z3 774 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 ZNF69Q9UC07 566 aa15.52■□□□□ 0.08
HMGXB3-202ENST00000503427 SCDO00767 359 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 CHP2O43745 196 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 SLC27A4Q6P1M0 643 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 PAQR7Q86WK9 346 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 GID4Q8IVV7 300 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 THRSPQ92748 146 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 PNO1Q9NRX1 252 aaKnown RBP15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 SERINC1Q9NRX5 453 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 HCN2Q9UL51 889 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 MAST2Q6P0Q8 1798 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 GSTM2P28161 218 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 GMPRP36959 345 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 EXOC3L2Q2M3D2 409 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 TTC9BQ8N6N2 239 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 OR5T3Q8NGG3 340 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 TM9SF2Q99805 663 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 CSNK1G1Q9HCP0 422 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 ZDHHC7Q9NXF8 308 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 IFT52Q9Y366 437 aa15.52■□□□□ 0.07
HMGXB3-202ENST00000503427 SNAPC5O75971 98 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 PAK4O96013 591 aaPredicted RBP15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 APOC1P02654 83 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 PIGFQ07326 219 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 GFOD2Q3B7J2 385 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 SNX29P2Q8IUI4 249 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 OR8J1Q8NGP2 316 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 SCGB3A2Q96PL1 93 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 PLAGL1Q9UM63 463 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 RUNX3Q13761 415 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 ARFRP1Q13795 201 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 ZNF615Q8N8J6 731 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 ZNF431Q8TF32 576 aaPredicted RBP15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 TOX2Q96NM4 488 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 C17orf62Q9BQA9 187 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 TRPV4Q9HBA0 871 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 ARMC1Q9NVT9 282 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 C2orf92A0A1B0GVN3 265 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 STATHP02808 62 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 HOXD8P13378 290 aaPredicted RBP15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 CTSOP43234 321 aaPredicted RBP15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 TCEAL6Q6IPX3 200 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 MSANTD1Q6ZTZ1 278 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 APCDD1Q8J025 514 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 PNLDC1Q8NA58 520 aaKnown RBP15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 OR52B6Q8NGF0 335 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 S100A16Q96FQ6 103 aaKnown RBP15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 ZNF821O75541 412 aaPredicted RBP15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 PIM1P11309 404 aaPredicted RBP15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 EPCAMP16422 314 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 PON2Q15165 354 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 SEC23BQ15437 767 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 ZNF227Q86WZ6 799 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 MAPK15Q8TD08 544 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 WDR92Q96MX6 357 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 CASD1Q96PB1 797 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 DHRS4Q9BTZ2 278 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 IGSF5Q9NSI5 407 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 GNG8Q9UK08 70 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 PCTPQ9UKL6 214 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 MGAT4AQ9UM21 535 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 PCDHGB5Q9Y5G0 923 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 PCDHGA7Q9Y5G6 932 aa15.51■□□□□ 0.07
HMGXB3-202ENST00000503427 WASH4PA8MWX3 477 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 TTC34A8MYJ7 566 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 EIF3FO00303 357 aaPredicted RBP15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 AGXTP21549 392 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 MAGEA6P43360 314 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 AP2S1P53680 142 aaPredicted RBP15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 MEF2AQ02078 507 aaPredicted RBP15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 DECR1Q16698 335 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 TP53INP2Q8IXH6 220 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 TMEM130Q8N3G9 435 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 CREB3L1Q96BA8 519 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 HHIPL1Q96JK4 782 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 CENPMQ9NSP4 180 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 TMEM45AQ9NWC5 275 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 NME4O00746 187 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 LDB2O43679 373 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 PCDHGA12O60330 932 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 GSTT2P0CG29 244 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 CLCA4Q14CN2 919 aa15.5■□□□□ 0.07
HMGXB3-202ENST00000503427 MAPK14Q16539 360 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms