RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PEX12O00623 359 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 FGF4P08620 206 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 FAM58BPP0C7Q3 252 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 LINC00032P0C843 101 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 ACPPP15309 386 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 CPN2P22792 545 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 GRK2P25098 689 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 CCNYL2Q5T2Q4 361 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 MRM1Q6IN84 353 aaKnown RBP15.5■□□□□ 0.07
SCLT1-205ENST00000503401 BORAQ6PGQ7 559 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 TMEM205Q6UW68 189 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 RIPOR1Q6ZS17 1223 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 TRIM46Q7Z4K8 759 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 GPR180Q86V85 440 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 OR2T11Q8NH01 316 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 CHTF18Q8WVB6 975 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 UCN3Q969E3 161 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 ING2Q9H160 280 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 NECTIN3Q9NQS3 549 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 ASB4Q9Y574 426 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 ATRXP46100 2492 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 A0A1W2PR48 441 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 SERTM1A2A2V5 107 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 WASHC1A8K0Z3 465 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 TGFBR3LH3BV60 316 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 PIP5K1BO14986 540 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 SKAP2O75563 359 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-205ENST00000503401 CHEK2O96017 543 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 COX6A1P12074 109 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 PPP2R2AP63151 447 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 ID2Q02363 134 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 ZNF33BQ06732 778 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 SLC13A2Q13183 592 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 LINC00303Q3SY05 128 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 QSOX2Q6ZRP7 698 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 PAGE2Q7Z2X7 111 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 ANKRD37Q7Z713 158 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 DDIASQ8IXT1 998 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 PLPP5Q8NEB5 264 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 TTC9Q92623 222 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 EBPLQ9BY08 206 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 PRDM9Q9NQV7 894 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 PRTFDC1Q9NRG1 225 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 TEX10Q9NXF1 929 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-205ENST00000503401 CCL27Q9Y4X3 112 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 SPACA6W5XKT8 324 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 CHD6Q8TD26 2715 aa15.5■□□□□ 0.07
SCLT1-205ENST00000503401 GLOD5A6NK44 160 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 PROM1O43490 865 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 LDB3O75112 727 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 ITGB2P05107 769 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 MAPK12P53778 367 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 RAE1P78406 368 aaKnown RBP15.49■□□□□ 0.07
SCLT1-205ENST00000503401 TNFRSF17Q02223 184 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 ACSM2AQ08AH3 577 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 DCAF10Q5QP82 559 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 ACSM2BQ68CK6 577 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 SCUBE1Q8IWY4 988 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 ADAMTS18Q8TE60 1221 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 APOBEC4Q8WW27 367 aaKnown RBP15.49■□□□□ 0.07
SCLT1-205ENST00000503401 NACC2Q96BF6 587 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 IP6K3Q96PC2 410 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 MANSC1Q9H8J5 431 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 ZNF160Q9HCG1 818 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 LYARQ9NX58 379 aaKnown RBP15.49■□□□□ 0.07
SCLT1-205ENST00000503401 PHF11Q9UIL8 331 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 ADAM29Q9UKF5 820 aa15.49■□□□□ 0.07
SCLT1-205ENST00000503401 MRPS33Q9Y291 106 aaKnown RBP15.49■□□□□ 0.07
SCLT1-205ENST00000503401 KALRNO60229 2985 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 LOC102723996A0A087X1L8 192 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 IGHV1-45A0A0A0MS14 117 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 A6NL46 340 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 CLDN4O14493 209 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 PCDH7O60245 1069 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 SEC24DO94855 1032 aaPredicted RBP15.48■□□□□ 0.07
SCLT1-205ENST00000503401 AIFM1O95831 613 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 JUNP05412 331 aaKnown RBP15.48■□□□□ 0.07
SCLT1-205ENST00000503401 FAM87AP0C7U9 286 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 PPP2R1BP30154 601 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 CCL11P51671 97 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 RAPSNQ13702 412 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 PCOLCEQ15113 449 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 SPIN4Q56A73 249 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 Q6ZSR9 355 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 MED25Q71SY5 747 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 CPEB2Q7Z5Q1 589 aaKnown RBP15.48■□□□□ 0.07
SCLT1-205ENST00000503401 OR4N5Q8IXE1 308 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 ZNF595Q8IYB9 648 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 MMP21Q8N119 569 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 PPP1R36Q96LQ0 422 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 ILKAPQ9H0C8 392 aaPredicted RBP15.48■□□□□ 0.07
SCLT1-205ENST00000503401 RPF2Q9H7B2 306 aaKnown RBP15.48■□□□□ 0.07
SCLT1-205ENST00000503401 PNPOQ9NVS9 261 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 GIMAP2Q9UG22 337 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 RAP2CQ9Y3L5 183 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 MMACHCQ9Y4U1 282 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 POLR3HQ9Y535 204 aaPredicted RBP15.48■□□□□ 0.07
SCLT1-205ENST00000503401 CLDN16Q9Y5I7 305 aa15.48■□□□□ 0.07
SCLT1-205ENST00000503401 TNRC6AQ8NDV7 1962 aaKnown RBP15.48■□□□□ 0.07
SCLT1-205ENST00000503401 IGKV3D-11A0A0A0MRZ8 115 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms