RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 SARGQ9BW04 601 aa6.94□□□□□ -1.3
CPNE4-202ENST00000502818 Q9H521 79 aa6.94□□□□□ -1.3
CPNE4-202ENST00000502818 ZNF696Q9H7X3 374 aa6.94□□□□□ -1.3
CPNE4-202ENST00000502818 KAT8Q9H7Z6 458 aaKnown RBP6.94□□□□□ -1.3
CPNE4-202ENST00000502818 DDX31Q9H8H2 851 aaKnown RBP6.94□□□□□ -1.3
CPNE4-202ENST00000502818 COPS7BQ9H9Q2 264 aaPredicted RBP6.94□□□□□ -1.3
CPNE4-202ENST00000502818 DDX18Q9NVP1 670 aaKnown RBP6.94□□□□□ -1.3
CPNE4-202ENST00000502818 TMEM9Q9P0T7 183 aa6.94□□□□□ -1.3
CPNE4-202ENST00000502818 FBXW2Q9UKT8 454 aa6.94□□□□□ -1.3
CPNE4-202ENST00000502818 PADI4Q9UM07 663 aa6.94□□□□□ -1.3
CPNE4-202ENST00000502818 SNX7Q9UNH6 387 aa6.94□□□□□ -1.3
CPNE4-202ENST00000502818 DOLKQ9UPQ8 538 aa6.94□□□□□ -1.3
CPNE4-202ENST00000502818 ASB4Q9Y574 426 aa6.94□□□□□ -1.3
CPNE4-202ENST00000502818 RNF215Q9Y6U7 377 aa6.94□□□□□ -1.3
CPNE4-202ENST00000502818 CACNA1EQ15878 2313 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 PRSS51A0A1B0GVH4 220 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 C1orf226A1L170 272 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 DYTNA2CJ06 578 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 SLC9B1P1A6NJY1 282 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 C2orf74A8MZ97 194 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 LMO7DNF2Z398 122 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 M0R296 226 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 CAPN5O15484 640 aaPredicted RBP6.93□□□□□ -1.3
CPNE4-202ENST00000502818 LAMTOR5O43504 91 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 TRMUO75648 421 aaKnown RBP6.93□□□□□ -1.3
CPNE4-202ENST00000502818 UBXN7O94888 489 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 SEMA3DO95025 777 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 NTRK1P04629 796 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 C8orf89P0DMQ9 161 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 ATXN8OSP0DMR3 200 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 ALPPL2P10696 532 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 IL1RNP18510 177 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 CTSKP43235 329 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 EEFSECP57772 596 aaKnown RBP6.93□□□□□ -1.3
CPNE4-202ENST00000502818 OR1D5P58170 312 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 SRSF11Q05519 484 aaKnown RBP6.93□□□□□ -1.3
CPNE4-202ENST00000502818 SLAMF1Q13291 335 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 LYSMD4Q5XG99 296 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 HMBOX1Q6NT76 420 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 KLHL35Q6PF15 583 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 CAMKMTQ7Z624 323 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 WDR5BQ86VZ2 330 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 LSRQ86X29 649 aaPredicted RBP6.93□□□□□ -1.3
CPNE4-202ENST00000502818 DHFR2Q86XF0 187 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 CALHM3Q86XJ0 350 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 GKN2Q86XP6 184 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 SLC35F3Q8IY50 421 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 METTL25Q8N6Q8 603 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 ACOT4Q8N9L9 421 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 OR8J3Q8NGG0 315 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 OR5T3Q8NGG3 340 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 OR4A15Q8NGL6 344 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 BAHD1Q8TBE0 780 aaPredicted RBP6.93□□□□□ -1.3
CPNE4-202ENST00000502818 UTP15Q8TED0 518 aaKnown RBP6.93□□□□□ -1.3
CPNE4-202ENST00000502818 SNRNP27Q8WVK2 155 aaKnown RBP6.93□□□□□ -1.3
CPNE4-202ENST00000502818 LRTOMTQ8WZ04 291 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 KLHL6Q8WZ60 621 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 PIGKQ92643 395 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 MAL2Q969L2 176 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 PPCDCQ96CD2 204 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 TM4SF19Q96DZ7 209 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 METTL2AQ96IZ6 378 aaKnown RBP6.93□□□□□ -1.3
CPNE4-202ENST00000502818 CCDC115Q96NT0 180 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 SEMA6AQ9H2E6 1030 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 ANKRA2Q9H9E1 313 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 KLHL3Q9UH77 587 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 VPS4AQ9UN37 437 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 TMEM131Q92545 1883 aa6.93□□□□□ -1.3
CPNE4-202ENST00000502818 A0A0J9YY10 115 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 SH3PXD2BA1X283 911 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 FAM149AA5PLN7 773 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 CCDC160A6NGH7 325 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 OR5K4A6NMS3 321 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 CLIC1O00299 241 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 PRMT3O60678 531 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 CBFA2T3O75081 653 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 TIPRLO75663 272 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 C8BP07358 591 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 FAM58BPP0C7Q3 252 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 HIST1H1TP22492 207 aaPredicted RBP6.92□□□□□ -1.3
CPNE4-202ENST00000502818 PEX2P28328 305 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 ALDH4A1P30038 563 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 HOXA6P31267 233 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 GRK3P35626 688 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 AHRP35869 848 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 HPCAL1P37235 193 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 ASMTP46597 345 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 FASLGP48023 281 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 MVDP53602 400 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 VSX2P58304 361 aaPredicted RBP6.92□□□□□ -1.3
CPNE4-202ENST00000502818 HNRNPKP61978 463 aaKnown RBP eCLIP6.92□□□□□ -1.3
CPNE4-202ENST00000502818 RPS26P62854 115 aaKnown RBP6.92□□□□□ -1.3
CPNE4-202ENST00000502818 TRAP1Q12931 704 aaKnown RBP6.92□□□□□ -1.3
CPNE4-202ENST00000502818 APOFQ13790 326 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 RUNX2Q13950 521 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 KCNAB1Q14722 419 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 DEFB134Q4QY38 66 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 WDR45BQ5MNZ6 344 aa6.92□□□□□ -1.3
CPNE4-202ENST00000502818 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.92□□□□□ -1.3
CPNE4-202ENST00000502818 C10orf62Q5T681 223 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms