RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 OPN5Q6U736 354 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 NXPE4Q6UWF7 544 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 CHSY3Q70JA7 882 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 ZNF595Q8IYB9 648 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 DAZLQ92904 295 aaKnown RBP12.88□□□□□ -0.35
CCDC58-207ENST00000498466 GAL3ST3Q96A11 431 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 SERPINB12Q96P63 405 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 SH3GL2Q99962 352 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 NPLQ9BXD5 320 aaPredicted RBP12.88□□□□□ -0.35
CCDC58-207ENST00000498466 OR8D2Q9GZM6 311 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 AICDAQ9GZX7 198 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 XAB2Q9HCS7 855 aaKnown RBP12.88□□□□□ -0.35
CCDC58-207ENST00000498466 NEUROD4Q9HD90 331 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 SEMA4BQ9NPR2 832 aaPredicted RBP12.88□□□□□ -0.35
CCDC58-207ENST00000498466 ATG4BQ9Y4P1 393 aa12.88□□□□□ -0.35
CCDC58-207ENST00000498466 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.87□□□□□ -0.35
CCDC58-207ENST00000498466 A0A088AWK7 358 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 MYOCOSA0A1B0GUC4 107 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 SYNDIG1LA6NDD5 238 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 TUBAL3A6NHL2 446 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 ERI3O43414 337 aaKnown RBP12.87□□□□□ -0.35
CCDC58-207ENST00000498466 B3GALT2O43825 422 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 ZNF10P21506 573 aaPredicted RBP12.87□□□□□ -0.35
CCDC58-207ENST00000498466 PIGAP37287 484 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 ZNF75DP51815 510 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 RNF4P78317 190 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 PDAP1Q13442 181 aaKnown RBP12.87□□□□□ -0.35
CCDC58-207ENST00000498466 RBM20Q5T481 1227 aaKnown RBP12.87□□□□□ -0.35
CCDC58-207ENST00000498466 THOC6Q86W42 341 aaKnown RBP12.87□□□□□ -0.35
CCDC58-207ENST00000498466 ULK2Q8IYT8 1036 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 FBXW8Q8N3Y1 598 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 ZNF321PQ8N8H1 164 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 GPATCH11Q8N954 259 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 C2CD4AQ8NCU7 369 aaPredicted RBP12.87□□□□□ -0.35
CCDC58-207ENST00000498466 MORN4Q8NDC4 146 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 OR5L2Q8NGL0 311 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 NUDT8Q8WV74 236 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 CCT6BQ92526 530 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 CAPZA3Q96KX2 299 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 ZNF395Q9H8N7 513 aaPredicted RBP12.87□□□□□ -0.35
CCDC58-207ENST00000498466 MTRF1LQ9UGC7 380 aaKnown RBP12.87□□□□□ -0.35
CCDC58-207ENST00000498466 FOXD3Q9UJU5 478 aaPredicted RBP12.87□□□□□ -0.35
CCDC58-207ENST00000498466 GUCA1BQ9UMX6 200 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 SLC22A14Q9Y267 594 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 KCNE2Q9Y6J6 123 aa12.87□□□□□ -0.35
CCDC58-207ENST00000498466 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.87□□□□□ -0.35
CCDC58-207ENST00000498466 DNAJC13O75165 2243 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 ZNF354AO60765 605 aaPredicted RBP12.86□□□□□ -0.35
CCDC58-207ENST00000498466 HEXAP06865 529 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 ENO2P09104 434 aaPredicted RBP12.86□□□□□ -0.35
CCDC58-207ENST00000498466 EPXP11678 715 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 TNNI3P19429 210 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 HNRNPH1P31943 449 aaKnown RBP12.86□□□□□ -0.35
CCDC58-207ENST00000498466 STX4Q12846 297 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 PCBP2Q15366 365 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC58-207ENST00000498466 FBXL19-AS1Q494R0 122 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 SEM1Q6ZVN7 128 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 TMEM139Q8IV31 216 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC58-207ENST00000498466 KLHDC8AQ8IYD2 350 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 LIX1Q8N485 282 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 NAXEQ8NCW5 288 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 MCUQ8NE86 351 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 OR8K3Q8NH51 312 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 OR14A16Q8NHC5 309 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 PTPMT1Q8WUK0 201 aaPredicted RBP12.86□□□□□ -0.35
CCDC58-207ENST00000498466 MS4A6EQ96DS6 147 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 ARSGQ96EG1 525 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 MDFIQ99750 246 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 ALOXE3Q9BYJ1 711 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 HOMER3Q9NSC5 361 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 TRMT1Q9NXH9 659 aaKnown RBP12.86□□□□□ -0.35
CCDC58-207ENST00000498466 PCDHGB3Q9Y5G1 929 aa12.86□□□□□ -0.35
CCDC58-207ENST00000498466 NSD1Q96L73 2696 aaPredicted RBP12.85□□□□□ -0.35
CCDC58-207ENST00000498466 LRIT2A6NDA9 550 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 FAM171A2A8MVW0 826 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 C17orf105B2RV13 164 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 CTNSO60931 367 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 KRT14P02533 472 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 PGGT1BP53609 377 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 PLA2G16P53816 162 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 DCAF7P61962 342 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 KCNJ2P63252 427 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 NKX6-1P78426 367 aaPredicted RBP12.85□□□□□ -0.35
CCDC58-207ENST00000498466 PRIMA1Q86XR5 153 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 KIF18BQ86Y91 864 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 AGGF1Q8N302 714 aaeCLIP12.85□□□□□ -0.35
CCDC58-207ENST00000498466 TNIP2Q8NFZ5 429 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 TTLQ8NG68 377 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 GABPB2Q8TAK5 448 aaPredicted RBP12.85□□□□□ -0.35
CCDC58-207ENST00000498466 SLC2A12Q8TD20 617 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 RUNDC3BQ96NL0 473 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 CSF3RQ99062 836 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 SLC6A15Q9H2J7 730 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 ZNF703Q9H7S9 590 aaPredicted RBP12.85□□□□□ -0.35
CCDC58-207ENST00000498466 PLEKHF2Q9H8W4 249 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 COPS7AQ9UBW8 275 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 ZNF629Q9UEG4 869 aaPredicted RBP12.85□□□□□ -0.35
CCDC58-207ENST00000498466 VTI1BQ9UEU0 232 aa12.85□□□□□ -0.35
CCDC58-207ENST00000498466 BOKQ9UMX3 212 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms