RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	SLC23A2	Q9UGH3	650 aa		5.08	□□□□□ -1.6
HMGXB4-208	ENST00000498325	FBXL7	Q9UJT9	491 aa		5.08	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PSMD13	Q9UNM6	376 aa		5.08	□□□□□ -1.6
HMGXB4-208	ENST00000498325	TDRKH	Q9Y2W6	561 aa	Known RBP	5.08	□□□□□ -1.6
HMGXB4-208	ENST00000498325	NDUFAF1	Q9Y375	327 aa		5.08	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ASB1	Q9Y576	335 aa		5.08	□□□□□ -1.6
HMGXB4-208	ENST00000498325	DMRT1	Q9Y5R6	373 aa		5.08	□□□□□ -1.6
HMGXB4-208	ENST00000498325	COLEC10	Q9Y6Z7	277 aa		5.08	□□□□□ -1.6
HMGXB4-208	ENST00000498325	URB1	O60287	2271 aa	Known RBP	5.08	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ACACA	Q13085	2346 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ATM	Q13315	3056 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325		A0A1W2PPC4	97 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PRSS38	A1L453	326 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	FAM149A	A5PLN7	773 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325		E7ENX8	843 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325		H0YIV9	168 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	AIM2	O14862	343 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	LSM1	O15116	133 aa	Known RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ANGPT2	O15123	496 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	NRP2	O60462	931 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SEC22B	O75396	215 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CIB2	O75838	187 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	MYO1D	O94832	1006 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	RASGRP1	O95267	797 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PDYN	P01213	254 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	C1GALT1C1L	P0DN25	315 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PRPS2	P11908	318 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	HSD3B1	P14060	373 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SLC2A4	P14672	509 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	NPPB	P16860	134 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	EPOR	P19235	508 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	GPX3	P22352	226 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PRPH2	P23942	346 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	HSD3B2	P26439	372 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	HTR6	P50406	440 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	BLK	P51451	505 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CLNS1A	P54105	237 aa	Known RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CLDN2	P57739	230 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	KCNK10	P57789	538 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SRP54	P61011	504 aa	Known RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	KCNJ2	P63252	427 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ELF3	P78545	371 aa	Predicted RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	TAP2	Q03519	686 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CSTF3	Q12996	717 aa	Known RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	LSAMP	Q13449	338 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	DOC2A	Q14183	400 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CYP2A13	Q16696	494 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CCSMST1	Q4G0I0	132 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PDCD4	Q53EL6	469 aa	Known RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SGO1	Q5FBB7	561 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	WASHC2D	Q5SRD0	308 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	FNDC7	Q5VTL7	733 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	FRG2	Q64ET8	278 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ATG9B	Q674R7	924 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	GRHL2	Q6ISB3	625 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	MED27	Q6P2C8	311 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ABRAXAS1	Q6UWZ7	409 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	WASH2P	Q6VEQ5	465 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SLC36A4	Q6YBV0	504 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325		Q6ZSR6	202 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	RD3	Q7Z3Z2	195 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ABI3BP	Q7Z7G0	1075 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SNX32	Q86XE0	403 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	KRT78	Q8N1N4	520 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SFRP1	Q8N474	314 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	DCBLD1	Q8N8Z6	715 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PPFIBP2	Q8ND30	876 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	RBM15B	Q8NDT2	890 aa	Known RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CADM4	Q8NFZ8	388 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	OR5AR1	Q8NGP9	310 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SLC5A11	Q8WWX8	675 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SMPDL3A	Q92484	453 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PPP1R14A	Q96A00	147 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	MTFMT	Q96DP5	389 aa	Known RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CMTM7	Q96FZ5	175 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	MARK4	Q96L34	752 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	C12orf66	Q96MD2	445 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	FRG2B	Q96QU4	278 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ZBTB18	Q99592	522 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	THTPA	Q9BU02	230 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	EFCAB11	Q9BUY7	163 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	GTPBP2	Q9BX10	602 aa	Known RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	GPR174	Q9BXC1	333 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	BRINP2	Q9C0B6	783 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	EPB41L1	Q9H4G0	881 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	EHD1	Q9H4M9	534 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	C6orf106	Q9H6K1	298 aa	Predicted RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	LRTM1	Q9HBL6	345 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	WASH6P	Q9NQA3	447 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	SDR39U1	Q9NRG7	319 aa	Predicted RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	TM7SF3	Q9NS93	570 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	AIG1	Q9NVV5	245 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	GID8	Q9NWU2	228 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	C1orf109	Q9NX04	203 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	TRNAU1AP	Q9NX07	287 aa	Known RBP	5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ASIC5	Q9NY37	505 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	ZIM2	Q9NZV7	527 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	CCDC167	Q9P0B6	97 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	BCAP29	Q9UHQ4	241 aa		5.07	□□□□□ -1.6
HMGXB4-208	ENST00000498325	PRPF19	Q9UMS4	504 aa	Known RBP	5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms