RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 SIRT6Q8N6T7 355 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 BRIX1Q8TDN6 353 aaKnown RBP15.38■□□□□ 0.05
SF3A1-209ENST00000496189 ZBTB9Q96C00 473 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 MTFMTQ96DP5 389 aaKnown RBP15.38■□□□□ 0.05
SF3A1-209ENST00000496189 IMMP1LQ96LU5 166 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 WDR77Q9BQA1 342 aaPredicted RBP15.38■□□□□ 0.05
SF3A1-209ENST00000496189 MESP1Q9BRJ9 268 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 TRMOQ9BU70 441 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 EPN3Q9H201 632 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 ACBD3Q9H3P7 528 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 WDR41Q9HAD4 459 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 PRDM7Q9NQW5 492 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 LYARQ9NX58 379 aaKnown RBP15.38■□□□□ 0.05
SF3A1-209ENST00000496189 MAP10Q9P2G4 905 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 TRPS1Q9UHF7 1281 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 PPT2Q9UMR5 302 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 MED13Q9UHV7 2174 aa15.38■□□□□ 0.05
SF3A1-209ENST00000496189 BOD1L1Q8NFC6 3051 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 ARHGAP10A1A4S6 786 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 FAM227AF5H4B4 570 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 DNAJB6O75190 326 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 CRCPO75575 148 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 TBX6O95947 436 aaPredicted RBP15.37■□□□□ 0.05
SF3A1-209ENST00000496189 KRT6AP02538 564 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 KRT6BP04259 564 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 ENO1P06733 434 aaKnown RBP15.37■□□□□ 0.05
SF3A1-209ENST00000496189 PPP2R1BP30154 601 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 HMOX2P30519 316 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 KRT6CP48668 564 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 ARG2P78540 354 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 BTG2P78543 158 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 Q0VFX4 171 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 NADK2Q4G0N4 442 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 AGBL2Q5U5Z8 902 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 FRMD7Q6ZUT3 714 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 NUDT13Q86X67 352 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 SUN3Q8TAQ9 357 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 DNAJB14Q8TBM8 379 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 WDR20Q8TBZ3 569 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 SELENOMQ8WWX9 145 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 CNDP1Q96KN2 507 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 SLC29A3Q9BZD2 475 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 GSTO2Q9H4Y5 243 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 KCNK13Q9HB14 408 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 FBXW2Q9UKT8 454 aa15.37■□□□□ 0.05
SF3A1-209ENST00000496189 TNRC6AQ8NDV7 1962 aaKnown RBP15.36■□□□□ 0.05
SF3A1-209ENST00000496189 TCRBV16S1A1N1A0A5B0 115 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 A8MUI8 341 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 RTCAO00442 366 aaKnown RBP15.36■□□□□ 0.05
SF3A1-209ENST00000496189 DYRK3O43781 588 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 OR4F21O95013 312 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 SEMA3DO95025 777 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 SCELO95171 688 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 ESRRBO95718 433 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 IFNA16P05015 189 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 ITGAMP11215 1152 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 ALDH3A1P30838 453 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 NEK2P51955 445 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 MAGOHP61326 146 aaKnown RBP15.36■□□□□ 0.05
SF3A1-209ENST00000496189 ZNF33BQ06732 778 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 SLAMF1Q13291 335 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 SERTAD2Q14140 314 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 SGO1Q5FBB7 561 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 SLC6A19Q695T7 634 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 LETMD1Q6P1Q0 360 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 ATCAYQ86WG3 371 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 NUDCD3Q8IVD9 361 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 ZCCHC7Q8N3Z6 543 aaKnown RBP15.36■□□□□ 0.05
SF3A1-209ENST00000496189 SLC5A8Q8N695 610 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 PPP1R14CQ8TAE6 165 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 METTL6Q8TCB7 284 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 ZNF354BQ96LW1 612 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 MAPKAP1Q9BPZ7 522 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 EML4Q9HC35 981 aaKnown RBP15.36■□□□□ 0.05
SF3A1-209ENST00000496189 MMP25Q9NPA2 562 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 MID1IP1Q9NPA3 183 aa15.36■□□□□ 0.05
SF3A1-209ENST00000496189 PNO1Q9NRX1 252 aaKnown RBP15.36■□□□□ 0.05
SF3A1-209ENST00000496189 UQCRHLA0A096LP55 91 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 SAGE2PA6NJ88 616 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 PPP6CO00743 305 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 PLPP1O14494 284 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 BIRC5O15392 142 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 CTNSO60931 367 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 GUCY1B2O75343 617 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 BPGMP07738 259 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 NEFHP12036 1026 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 COX7A2P14406 83 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 SERPINB5P36952 375 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 SERPINB4P48594 390 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 EFNA3P52797 238 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 SLC26A5P58743 744 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 BIKQ13323 160 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 TLR1Q15399 786 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 TERF2Q15554 542 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 IGFL2Q6UWQ7 119 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 ZNF793Q6ZN11 406 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 UBE3DQ7Z6J8 389 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 GPR180Q86V85 440 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 SCUBE1Q8IWY4 988 aa15.35■□□□□ 0.05
SF3A1-209ENST00000496189 TMEM132CQ8N3T6 1108 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms