RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TM7SF3Q9NS93 570 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ACSS1Q9NUB1 689 aaPredicted RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 POT1Q9NUX5 634 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 CUEDC1Q9NWM3 386 aaPredicted RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 TRNAU1APQ9NX07 287 aaKnown RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 EHD3Q9NZN3 535 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ZNF639Q9UID6 485 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 PSME2Q9UL46 239 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 USP22Q9UPT9 525 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 SH2B3Q9UQQ2 575 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 FAM32AQ9Y421 112 aaKnown RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 NEUROG3Q9Y4Z2 214 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ENTPD2Q9Y5L3 495 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 GPC6Q9Y625 555 aaPredicted RBP6.6□□□□□ -1.35
USP39-219ENST00000496047 DGKBQ9Y6T7 804 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 EML5Q05BV3 1969 aa6.6□□□□□ -1.35
USP39-219ENST00000496047 ZDBF2Q9HCK1 2354 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 BRWD1Q9NSI6 2320 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 KIR2DS5A0A0G2JLQ3 304 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 A0A0G2JNG1 304 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 A0A1W2PPV9 198 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 FEZF1A0PJY2 475 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 C7orf72A4D263 438 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 H3BNH8 94 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 KIR2DS3K7RE56 304 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SCN2BO60939 215 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 ADAM23O75077 832 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 KCNK5O95279 499 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 BMP10O95393 424 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 MT-ND1P03886 318 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 NTRK1P04629 796 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 PABPC4LP0CB38 370 aaKnown RBP6.59□□□□□ -1.35
USP39-219ENST00000496047 ARAFP10398 606 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SRFP11831 508 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 F3P13726 295 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 CTSEP14091 401 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 ATP6V1B1P15313 513 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 IGFBP5P24593 272 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 PSMB5P28074 263 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 TPP2P29144 1249 aaPredicted RBP6.59□□□□□ -1.35
USP39-219ENST00000496047 PTPN6P29350 595 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 BUD31P41223 144 aaPredicted RBP6.59□□□□□ -1.35
USP39-219ENST00000496047 MAGEA2P43356 314 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 KHKP50053 298 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 GZMMP51124 257 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 TPMTP51580 245 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SRP54P61011 504 aaKnown RBP6.59□□□□□ -1.35
USP39-219ENST00000496047 SKP1P63208 163 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 HBA1P69905 142 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 MYBPC1Q00872 1141 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 DLX2Q07687 328 aaPredicted RBP6.59□□□□□ -1.35
USP39-219ENST00000496047 TP53BP2Q13625 1128 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SPIDRQ14159 915 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 KIR2DS5Q14953 304 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 MLC1Q15049 377 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 MLF2Q15773 248 aaPredicted RBP6.59□□□□□ -1.35
USP39-219ENST00000496047 NHSL2Q5HYW2 709 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 TOR1AIP1Q5JTV8 583 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 RBM48Q5RL73 367 aaKnown RBP6.59□□□□□ -1.35
USP39-219ENST00000496047 KIAA0895LQ68EN5 471 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 ARMC6Q6NXE6 501 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SHQ1Q6PI26 577 aaKnown RBP6.59□□□□□ -1.35
USP39-219ENST00000496047 ZNF852Q6ZMS4 543 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 FAM92BQ6ZTR7 304 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 RD3Q7Z3Z2 195 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SZRD1Q7Z422 152 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 KRT73Q86Y46 540 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 DCP2Q8IU60 420 aaKnown RBP6.59□□□□□ -1.35
USP39-219ENST00000496047 SLC44A3Q8N4M1 653 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 MFSD9Q8NBP5 474 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 OR2L5Q8NG80 312 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 OR2L3Q8NG85 312 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 WDR48Q8TAF3 677 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SPPL2AQ8TCT8 520 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SFXN5Q8TD22 340 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 NETO1Q8TDF5 533 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 GEMIN6Q8WXD5 167 aaKnown RBP6.59□□□□□ -1.35
USP39-219ENST00000496047 GAL3ST3Q96A11 431 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 TPD52L3Q96J77 140 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 BBS4Q96RK4 519 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 ZNF607Q96SK3 696 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 APOL4Q9BPW4 351 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 DOHHQ9BU89 302 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SPATA5L1Q9BVQ7 753 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 YIPF3Q9GZM5 350 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 GABARAPL1Q9H0R8 117 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SPNS1Q9H2V7 528 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 IKZF5Q9H5V7 419 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 ZNF556Q9HAH1 456 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 KCNK12Q9HB15 430 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 FGF22Q9HCT0 170 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 IL1RAPQ9NPH3 570 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 DDX18Q9NVP1 670 aaKnown RBP6.59□□□□□ -1.35
USP39-219ENST00000496047 P2RX2Q9UBL9 471 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 PHF11Q9UIL8 331 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SNX8Q9Y5X2 465 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 SNX5Q9Y5X3 404 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 MTCH2Q9Y6C9 303 aa6.59□□□□□ -1.35
USP39-219ENST00000496047 NUP210LQ5VU65 1888 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 GSAPA4D1B5 854 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms