RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 HEXAP06865 529 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 CHRM2P08172 466 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 MMP2P08253 660 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 CD48P09326 243 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 HOXB9P17482 250 aaPredicted RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 CTPS1P17812 591 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 FMO4P31512 558 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 PCK1P35558 622 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 PRKCIP41743 596 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 CAPZBP47756 277 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 HCAR3P49019 387 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 ARSEP51690 589 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 ZNF41P51814 821 aaPredicted RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 DCDC1P59894 354 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 PPP1CAP62136 330 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 SLC25A3Q00325 362 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 MYL5Q02045 173 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 NIPAL4Q0D2K0 466 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 CSTF3Q12996 717 aaKnown RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 NFATC2Q13469 925 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 PPP6R3Q5H9R7 873 aaPredicted RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 DCAF12Q5T6F0 453 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 DENND2CQ68D51 928 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 NCBP2-AS2Q69YL0 99 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 OGFOD2Q6N063 350 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 ARMC6Q6NXE6 501 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 SARM1Q6SZW1 724 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 KIRREL2Q6UWL6 708 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 USP51Q70EK9 711 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 MOB3CQ70IA8 216 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 Q71RC1 249 aaPredicted RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 MARK2Q7KZI7 788 aaKnown RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 ZNF571Q7Z3V5 609 aaPredicted RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 PRSS42Q7Z5A4 293 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 IRF2BP2Q7Z5L9 587 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 CCDC13Q8IYE1 715 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 ATPAF2Q8N5M1 289 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 NIPA2Q8N8Q9 360 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 SCAIQ8N9R8 606 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 POC5Q8NA72 575 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 ZBTB8BQ8NAP8 495 aaPredicted RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 CCDC112Q8NEF3 446 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 SRFBP1Q8NEF9 429 aaKnown RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 GABPB2Q8TAK5 448 aaPredicted RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 ARRDC2Q8TBH0 407 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 ASB10Q8WXI3 467 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 HSPH1Q92598 858 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 MMABQ96EY8 250 aaPredicted RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 VMP1Q96GC9 406 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 ZNF845Q96IR2 970 aaPredicted RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 PBKQ96KB5 322 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 FYTTD1Q96QD9 318 aaKnown RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 TEFMQ96QE5 360 aaKnown RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 RUFY1Q96T51 708 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 CTRCQ99895 268 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 SMR3AQ99954 134 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 SRSF8Q9BRL6 282 aaKnown RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 GPATCH1Q9BRR8 931 aaKnown RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 ALG8Q9BVK2 526 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 RIOK2Q9BVS4 552 aaKnown RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 TBC1D10AQ9BXI6 508 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 FSD1LQ9BXM9 530 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 KLHL4Q9C0H6 718 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 DUSP22Q9NRW4 184 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 PARVAQ9NVD7 372 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 GAR1Q9NY12 217 aaKnown RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 SLC39A1Q9NY26 324 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 ASIC5Q9NY37 505 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 EHD3Q9NZN3 535 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 AKAP7Q9P0M2 348 aaPredicted RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 KIAA1456Q9P272 454 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 MARCH4Q9P2E8 410 aaPredicted RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 FBXL17Q9UF56 701 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 PCSK1NQ9UHG2 260 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 MOSPD1Q9UJG1 213 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 NENFQ9UMX5 172 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 KCNK6Q9Y257 313 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 CCL27Q9Y4X3 112 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 TLN2Q9Y4G6 2542 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 OR2A25A4D2G3 310 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 CBY3A6NI87 242 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 CHUKO15111 745 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 PRPSAP2O60256 369 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 NUAK1O60285 661 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 ATP1A1P05023 1023 aaKnown RBP4.07□□□□□ -1.76
VPS52-222ENST00000495981 ADH4P08319 380 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 QDPRP09417 244 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 CYP2A6P11509 494 aaPredicted RBP4.07□□□□□ -1.76
VPS52-222ENST00000495981 F3P13726 295 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 CD99P14209 185 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 FERP16591 822 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 ZFXP17010 805 aaPredicted RBP4.07□□□□□ -1.76
VPS52-222ENST00000495981 ZNF30P17039 623 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 IL4RP24394 825 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 CSTF2P33240 577 aaKnown RBP eCLIP4.07□□□□□ -1.76
VPS52-222ENST00000495981 MMP13P45452 471 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 GPR1P46091 355 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 LEPRP48357 1165 aaKnown RBP4.07□□□□□ -1.76
VPS52-222ENST00000495981 CDH6P55285 790 aa4.07□□□□□ -1.76
VPS52-222ENST00000495981 POLR2LP62875 67 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms