RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	VMP1	Q96GC9	406 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	TAAR6	Q96RI8	345 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	MTERF1	Q99551	399 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	MAPKAP1	Q9BPZ7	522 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	UTP23	Q9BRU9	249 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	C1QTNF3	Q9BXJ4	246 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	OR51B5	Q9H339	312 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	NOL11	Q9H8H0	719 aa	Known RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	OLAH	Q9NV23	265 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	MS4A12	Q9NXJ0	267 aa		12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.46	□□□□□ -0.41
RBM28-208	ENST00000495327	IQANK1	A0A1B0GTG1	560 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327		A8MT66	165 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	FOXE1	O00358	373 aa	Predicted RBP	12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	MAN1A2	O60476	641 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	AGFG2	O95081	481 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	RASAL1	O95294	804 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	PTX3	P26022	381 aa	Predicted RBP	12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	TPP2	P29144	1249 aa	Predicted RBP	12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	CLCN2	P51788	898 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	GPR143	P51810	404 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	CCNG1	P51959	295 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	RAP1GDS1	P52306	607 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	RPS13	P62277	151 aa	Known RBP	12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	SERTAD2	Q14140	314 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	SLC29A2	Q14542	456 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	CPSF6	Q16630	551 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	ZNF766	Q5HY98	468 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	GSPT2	Q8IYD1	628 aa	Known RBP	12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	TMEM132C	Q8N3T6	1108 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	TMEM151A	Q8N4L1	468 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	HORMAD2	Q8N7B1	307 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	OR52B6	Q8NGF0	335 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	DNAJB8	Q8NHS0	232 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	ACMSD	Q8TDX5	336 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	ZNF483	Q8TF39	744 aa	Predicted RBP	12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	NR4A3	Q92570	626 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	SCMH1	Q96GD3	660 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	SIGLEC12	Q96PQ1	595 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	ZNF717	Q9BY31	904 aa	Predicted RBP	12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	CDCP1	Q9H5V8	836 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	ZBTB26	Q9HCK0	441 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	PRM3	Q9NNZ6	103 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	PNO1	Q9NRX1	252 aa	Known RBP	12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	VTI1B	Q9UEU0	232 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	PHF11	Q9UIL8	331 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	ZNF223	Q9UK11	482 aa	Predicted RBP	12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	RNF11	Q9Y3C5	154 aa		12.45	□□□□□ -0.42
RBM28-208	ENST00000495327	TRBV11-1	A0A0K0K1C0	115 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327		A8MUA0	341 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	SAP18	O00422	153 aa	Known RBP	12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	FCHO1	O14526	889 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	SEMA7A	O75326	666 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	SH3BGRL	O75368	114 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	NEURL1	O76050	574 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	SEMA3D	O95025	777 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	CRYAB	P02511	175 aa	Known RBP	12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	CPN2	P22792	545 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	PPP2R1B	P30154	601 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	TRHR	P34981	398 aa	Predicted RBP	12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	CD96	P40200	585 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	MLF1	P58340	268 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	IGLV3-21	P80748	117 aa	Predicted RBP	12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	TNFRSF17	Q02223	184 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	OR1C1	Q15619	314 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	ZRSR2	Q15696	482 aa	Known RBP	12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	CLNK	Q7Z7G1	428 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	TMEM178A	Q8NBL3	297 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	MYRIP	Q8NFW9	859 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	OR14A16	Q8NHC5	309 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	PRR7	Q8TB68	274 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	SSC4D	Q8WTU2	575 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	MZB1	Q8WU39	189 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	DAZL	Q92904	295 aa	Known RBP	12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	NCLN	Q969V3	563 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	ATP6V1E2	Q96A05	226 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	NSUN5	Q96P11	429 aa	Known RBP	12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	CDK15	Q96Q40	435 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	DEFB126	Q9BYW3	111 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	LYAR	Q9NX58	379 aa	Known RBP	12.44	□□□□□ -0.42
RBM28-208	ENST00000495327	FBXW2	Q9UKT8	454 aa		12.44	□□□□□ -0.42
RBM28-208	ENST00000495327		A0A0A6YYD5	115 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	ETHE1	O95571	254 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	GSTA1	P08263	222 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	CD46	P15529	392 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	TAC1	P20366	129 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	BSG	P35613	385 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	ARL1	P40616	181 aa	Predicted RBP	12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	BUD31	P41223	144 aa	Predicted RBP	12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	STX4	Q12846	297 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	SLAMF1	Q13291	335 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	BIK	Q13323	160 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	TEX35	Q5T0J7	233 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	FRG2	Q64ET8	278 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	MRM1	Q6IN84	353 aa	Known RBP	12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	NUDT13	Q86X67	352 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	MORN4	Q8NDC4	146 aa		12.43	□□□□□ -0.42
RBM28-208	ENST00000495327	C5orf34	Q96MH7	638 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms