RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ARHGAP10A1A4S6 786 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 BLACEA4D250 179 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 CCDC151A5D8V7 595 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 RGS16O15492 202 aaPredicted RBP14.94□□□□□ -0.02
LIME1-209ENST00000494776 CTNSO60931 367 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 SPAG7O75391 227 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 SEMA3DO95025 777 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 ETHE1O95571 254 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 PDYNP01213 254 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 IFNA16P05015 189 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 BUD31P41223 144 aaPredicted RBP14.94□□□□□ -0.02
LIME1-209ENST00000494776 HNRNPFP52597 415 aaKnown RBP14.94□□□□□ -0.02
LIME1-209ENST00000494776 NAGLUP54802 743 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 PKNOX1P55347 436 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 SLC26A5P58743 744 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 TAS2R50P59544 299 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 TLE1Q04724 770 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 MFAP5Q13361 173 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 ABHD17BQ5VST6 288 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 SLC6A19Q695T7 634 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 PAGE2Q7Z2X7 111 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 GPR180Q86V85 440 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 NUDT13Q86X67 352 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 SCUBE1Q8IWY4 988 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 ZCCHC7Q8N3Z6 543 aaKnown RBP14.94□□□□□ -0.02
LIME1-209ENST00000494776 AMER2Q8N7J2 671 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 BANPQ8N9N5 519 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 DNAJB14Q8TBM8 379 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 PNPLA2Q96AD5 504 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 CNDP1Q96KN2 507 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 SLC29A3Q9BZD2 475 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 ILKAPQ9H0C8 392 aaPredicted RBP14.94□□□□□ -0.02
LIME1-209ENST00000494776 CENPHQ9H3R5 247 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 FARSBQ9NSD9 589 aaKnown RBP14.94□□□□□ -0.02
LIME1-209ENST00000494776 OXSMQ9NWU1 459 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 LYARQ9NX58 379 aaKnown RBP14.94□□□□□ -0.02
LIME1-209ENST00000494776 LUZP4Q9P127 313 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 PPT2Q9UMR5 302 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 PLLPQ9Y342 182 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 CFAP46Q8IYW2 2715 aa14.94□□□□□ -0.02
LIME1-209ENST00000494776 DYTNA2CJ06 578 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 SYNDIG1LA6NDD5 238 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 SAGE2PA6NJ88 616 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 MANBAO00462 879 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 ULK1O75385 1050 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 EEDO75530 441 aaKnown RBP14.93□□□□□ -0.02
LIME1-209ENST00000494776 CRCPO75575 148 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 MYO1DO94832 1006 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 ENO1P06733 434 aaKnown RBP14.93□□□□□ -0.02
LIME1-209ENST00000494776 BSGP35613 385 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 CD97P48960 835 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 DNAJB13P59910 316 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 ARG2P78540 354 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 ZNF33BQ06732 778 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 ASPHQ12797 758 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 LIPMQ5VYY2 423 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 B3GNTL1Q67FW5 361 aaPredicted RBP14.93□□□□□ -0.02
LIME1-209ENST00000494776 PSMF1Q92530 271 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 FAM111AQ96PZ2 611 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 ALOXE3Q9BYJ1 711 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 GSTO2Q9H4Y5 243 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 RPF2Q9H7B2 306 aaKnown RBP14.93□□□□□ -0.02
LIME1-209ENST00000494776 DDX31Q9H8H2 851 aaKnown RBP14.93□□□□□ -0.02
LIME1-209ENST00000494776 BRF2Q9HAW0 419 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 MMP25Q9NPA2 562 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 MID1IP1Q9NPA3 183 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 MKS1Q9NXB0 559 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 STMN3Q9NZ72 180 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 MAP10Q9P2G4 905 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 ZNF225Q9UK10 706 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 B3GNT3Q9Y2A9 372 aa14.93□□□□□ -0.02
LIME1-209ENST00000494776 SCN2AQ99250 2005 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 MYOCOSA0A1B0GUC4 107 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 LDB3O75112 727 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 ESRRBO95718 433 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 GBAP04062 536 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 KLK1P06870 262 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 FAM58BPP0C7Q3 252 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 TNNI3P19429 210 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 MLLT10P55197 1068 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 TNFRSF17Q02223 184 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 ZNF844Q08AG5 666 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 SERTAD2Q14140 314 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 TCHHL1Q5QJ38 904 aaPredicted RBP14.92□□□□□ -0.02
LIME1-209ENST00000494776 CEP85LQ5SZL2 805 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 CCNYL2Q5T2Q4 361 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 IGFL2Q6UWQ7 119 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 C10orf107Q8IVU9 208 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 SLC5A8Q8N695 610 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 C7orf57Q8NEG2 295 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 ZNF354BQ96LW1 612 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 HBEGFQ99075 208 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 MRPL1Q9BYD6 325 aaKnown RBP14.92□□□□□ -0.02
LIME1-209ENST00000494776 WDR41Q9HAD4 459 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 ADAP2Q9NPF8 381 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 PLA2G3Q9NZ20 509 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 SENP1Q9P0U3 644 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 ABI3Q9P2A4 366 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 ATG4BQ9Y4P1 393 aa14.92□□□□□ -0.02
LIME1-209ENST00000494776 CLCA3PQ9Y6N3 262 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms