RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 MTERF1Q99551 399 aaKnown RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 SLC25A23Q9BV35 468 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 C12orf65Q9H3J6 166 aaKnown RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 GSTO2Q9H4Y5 243 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF71Q9NQZ8 489 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 PSD3Q9NYI0 1048 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 GPR83Q9NYM4 423 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 KCMF1Q9P0J7 381 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 PLAAQ9Y263 795 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 NSG1A0A0A6YYJ2 146 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 TCRBV16S1A1N1A0A5B0 115 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 TLDC2A0PJX2 215 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 A6NL46 340 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 EIF4E1BA6NMX2 242 aaKnown RBP8.23□□□□□ -1.09
ITGB1-217ENST00000494395 RTCAO00442 366 aaKnown RBP8.23□□□□□ -1.09
ITGB1-217ENST00000494395 PLPP1O14494 284 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 SUV39H1O43463 412 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 FBXO24O75426 580 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 CDC123O75794 336 aaPredicted RBP8.23□□□□□ -1.09
ITGB1-217ENST00000494395 TUBBP07437 444 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 CELA2AP08217 269 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 PRR35P0CG20 571 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 KRT4P19013 534 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 TSPAN8P19075 237 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 TAC1P20366 129 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 IMPDH1P20839 514 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 JAK1P23458 1154 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 CERS1P27544 350 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 TSFMP43897 325 aaKnown RBP8.23□□□□□ -1.09
ITGB1-217ENST00000494395 PGDP52209 483 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 ARFIP1P53367 373 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 MTTPP55157 894 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 LIM2P55344 173 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 RAB38P57729 211 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 RPS13P62277 151 aaKnown RBP8.23□□□□□ -1.09
ITGB1-217ENST00000494395 BTG2P78543 158 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 CLCQ05315 142 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 C19orf57Q0VDD7 668 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 RAPSNQ13702 412 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 ABRAXAS2Q15018 415 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 CCDC153Q494R4 210 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 MINDY4Q4G0A6 757 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 TNFAIP8L3Q5GJ75 292 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 MRM1Q6IN84 353 aaKnown RBP8.23□□□□□ -1.09
ITGB1-217ENST00000494395 IGFL2Q6UWQ7 119 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 ASB18Q6ZVZ8 466 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 NDUFAF7Q7L592 441 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 CPEB2Q7Z5Q1 589 aaKnown RBP8.23□□□□□ -1.09
ITGB1-217ENST00000494395 IQCKQ8N0W5 287 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 C4orf33Q8N1A6 199 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 BANPQ8N9N5 519 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 SRFBP1Q8NEF9 429 aaKnown RBP8.23□□□□□ -1.09
ITGB1-217ENST00000494395 VPS50Q96JG6 964 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 KCNC2Q96PR1 638 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF382Q96SR6 550 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 CSF3RQ99062 836 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 TBCDQ9BTW9 1192 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 LHPPQ9H008 270 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 OR51B5Q9H339 312 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF160Q9HCG1 818 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 LYRM4Q9HD34 91 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 SEMA4BQ9NPR2 832 aaPredicted RBP8.23□□□□□ -1.09
ITGB1-217ENST00000494395 NECTIN3Q9NQS3 549 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 RIC8BQ9NVN3 520 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 C5AR2Q9P296 337 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 TRPS1Q9UHF7 1281 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 GRID1Q9ULK0 1009 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 DAPP1Q9UN19 280 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF451Q9Y4E5 1061 aa8.23□□□□□ -1.09
ITGB1-217ENST00000494395 A0A088AWK7 358 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 IGHV3-20A0A0C4DH32 117 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 UBFD1O14562 309 aaKnown RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 COPEO14579 308 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 B3GALT2O43825 422 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 B4GALT2O60909 372 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 SH3BGRLO75368 114 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 SUPT7LO94864 414 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 OR4F21O95013 312 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 SEMA3DO95025 777 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 OTCP00480 354 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 ITGAMP11215 1152 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 MAOAP21397 527 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF10P21506 573 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 HIST1H1TP22492 207 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 BSGP35613 385 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 CD97P48960 835 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 NEK2P51955 445 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 DNAJB13P59910 316 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF844Q08AG5 666 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 CUL3Q13618 768 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 DDX39BQ13838 428 aaKnown RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 PCLAFQ15004 111 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 SFT2D3Q587I9 215 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 C10orf62Q5T681 223 aaPredicted RBP8.22□□□□□ -1.09
ITGB1-217ENST00000494395 MFSD4BQ5TF39 518 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 FRG2Q64ET8 278 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 PLAG1Q6DJT9 500 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 OR4C11Q6IEV9 310 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 IGFL3Q6UXB1 125 aa8.22□□□□□ -1.09
ITGB1-217ENST00000494395 CHSY3Q70JA7 882 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms