RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 MED27Q6P2C8 311 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 ABHD17CQ6PCB6 329 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 PAOXQ6QHF9 649 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 FGD2Q7Z6J4 655 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 CLNKQ7Z7G1 428 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 MCEMP1Q8IX19 187 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 ARMC10Q8N2F6 343 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 CPSF7Q8N684 471 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 ZNF321PQ8N8H1 164 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 NCLNQ969V3 563 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 NXNL1Q96CM4 212 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 F2RL3Q96RI0 385 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 CENPKQ9BS16 269 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 TBCDQ9BTW9 1192 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 CD244Q9BZW8 370 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 LIN28AQ9H9Z2 209 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 PRDM7Q9NQW5 492 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 HPF1Q9NWY4 346 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 NUDT4Q9NZJ9 180 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 OPTCQ9UBM4 332 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 ADGRE2Q9UHX3 823 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 DAPP1Q9UN19 280 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 MEMO1Q9Y316 297 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 ANGPTL3Q9Y5C1 460 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 FBN2P35556 2912 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 DIDO1Q9BTC0 2240 aaKnown RBP12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 NCOA6Q14686 2063 aaPredicted RBP12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 SYCE1LA8MT33 242 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 SUPT3HB4E1H0 165 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 DYRK3O43781 588 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 PEX1O43933 1283 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 SH3BGRLO75368 114 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 SUPT3HO75486 399 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 TUBB4AP04350 444 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 LTA4HP09960 611 aaKnown RBP12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 PCNAP12004 261 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 PRF1P14222 555 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 TNFRSF8P28908 595 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 MEOX1P50221 254 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 PHEXP78562 749 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 NAB1Q13506 487 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 TBCCQ15814 346 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 TMEM35AQ53FP2 167 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 HSDL2Q6YN16 418 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 CCDC91Q7Z6B0 441 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 SULF2Q8IWU5 870 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 MORN4Q8NDC4 146 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 OR5L2Q8NGL0 311 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 KCTD4Q8WVF5 259 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 ASB15Q8WXK1 588 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 MRRFQ96E11 262 aaKnown RBP12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 LRRC1Q9BTT6 524 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 SORBS1Q9BX66 1292 aaKnown RBP12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 MS4A8Q9BY19 250 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 ALOXE3Q9BYJ1 711 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 LYRM4Q9HD34 91 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 COQ3Q9NZJ6 369 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 KCMF1Q9P0J7 381 aa12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 PPIEQ9UNP9 301 aaKnown RBP12.47□□□□□ -0.41
CTDSP1-212ENST00000494067 CSMD2Q7Z408 3487 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 ACOT7O00154 380 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 CDC40O60508 579 aaKnown RBP eCLIP12.46□□□□□ -0.415e-7■■■■□ 22.3
CTDSP1-212ENST00000494067 CLDN14O95500 239 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 COX7A2P14406 83 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 EPB42P16452 691 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 CPN2P22792 545 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 PTGS2P35354 604 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 ADORA2A-AS1P86434 159 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 GDF7Q7Z4P5 450 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 OR14A16Q8NHC5 309 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 AGAP11Q8TF27 550 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 ZNF473Q8WTR7 871 aaKnown RBP12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 UBTD2Q8WUN7 234 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 CMTM7Q96FZ5 175 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 GPR78Q96P69 363 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 MAPKAP1Q9BPZ7 522 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 MS4A12Q9NXJ0 267 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 COPS7AQ9UBW8 275 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 VTI1BQ9UEU0 232 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 ACOT9Q9Y305 439 aa12.46□□□□□ -0.41
CTDSP1-212ENST00000494067 CENPEQ02224 2701 aa12.46□□□□□ -0.42
CTDSP1-212ENST00000494067 EML6Q6ZMW3 1958 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 CACNA1DQ01668 2161 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 A0A087X1B8 175 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 CCDC189A1A4V9 331 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 E9PLN8 166 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 K7EPI3 171 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 SAP18O00422 153 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 ZNF354AO60765 605 aaPredicted RBP12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 KERAO60938 352 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 TGFB1P01137 390 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 TLX1P31314 330 aaPredicted RBP12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 RFC3P40938 356 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 CASP2P42575 452 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 SSR2P43308 183 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 RAP1GDS1P52306 607 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 PLGLB1Q02325 96 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 ID2Q02363 134 aa12.45□□□□□ -0.42
CTDSP1-212ENST00000494067 BIKQ13323 160 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms