RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 KCNC2Q96PR1 638 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 C1QTNF7Q9BXJ2 289 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 SPNS1Q9H2V7 528 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 WDR26Q9H7D7 661 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 DDX31Q9H8H2 851 aaKnown RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 FBXO8Q9NRD0 319 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ACER3Q9NUN7 267 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 FKBP14Q9NWM8 211 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 CNOT2Q9NZN8 540 aaKnown RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ERGIC3Q9Y282 383 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 SH3GLB1Q9Y371 365 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 SNX8Q9Y5X2 465 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 A3GALT2U3KPV4 340 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 TMX2-CTNND1H3BSU7 103 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 NDUFS4O43181 175 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 CNOT3O75175 753 aaKnown RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 PCDH8O95206 1070 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 KAT7O95251 611 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 OPN1SWP03999 348 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 APODP05090 189 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 PCCBP05166 539 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 OCM2P0CE71 109 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 OCMP0CE72 109 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 CD36P16671 472 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 PPP2R1BP30154 601 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 TRIM23P36406 574 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 IL12RB1P42701 662 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 MAP2K4P45985 399 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 MASP1P48740 699 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 PCBP4P57723 403 aaKnown RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ABATP80404 500 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 WSCD2Q2TBF2 565 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 TOR1AIP1Q5JTV8 583 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 IER5LQ5T953 404 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 KRT73Q86Y46 540 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 PLD3Q8IV08 490 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 CCDC71Q8IV32 467 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 STX19Q8N4C7 294 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 TMCO5AQ8N6Q1 288 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 PLA2G15Q8NCC3 412 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 SRFBP1Q8NEF9 429 aaKnown RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 OR5AK3PQ8NH89 298 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 APH1BQ8WW43 257 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 MOAP1Q96BY2 351 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 LGALS12Q96DT0 336 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ZFYVE19Q96K21 471 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ALPK1Q96QP1 1244 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ACAT2Q9BWD1 397 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 RSPH9Q9H1X1 276 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 CXorf36Q9H7Y0 433 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 CLN6Q9NWW5 311 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 WBP1LQ9NX94 342 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 GIN1Q9NXP7 522 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 KCND3Q9UK17 655 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ACSL6Q9UKU0 697 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 DUSP12Q9UNI6 340 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 MGAT4BQ9UQ53 548 aa9.19□□□□□ -0.94
NPHP3-209ENST00000493732 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.19□□□□□ -0.94
NPHP3-209ENST00000493732 LRRK1Q38SD2 2015 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 KIAA1549LQ6ZVL6 1849 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 hCG_2014768A0A024R1R8 64 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 IGLON5A6NGN9 336 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 OR1F1O43749 312 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 NADKO95544 446 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-209ENST00000493732 CBLP22681 906 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 EPHA2P29317 976 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 OPRD1P41143 372 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 TSFMP43897 325 aaKnown RBP9.18□□□□□ -0.94
NPHP3-209ENST00000493732 OR1E2P47887 323 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 IDH2P48735 452 aaKnown RBP9.18□□□□□ -0.94
NPHP3-209ENST00000493732 CLK1P49759 484 aaKnown RBP9.18□□□□□ -0.94
NPHP3-209ENST00000493732 RAB28P51157 221 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 CLCNKAP51800 687 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 PRDX1Q06830 199 aaKnown RBP9.18□□□□□ -0.94
NPHP3-209ENST00000493732 DGCR6Q14129 220 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 CST6Q15828 149 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 SMN1Q16637 294 aaKnown RBP9.18□□□□□ -0.94
NPHP3-209ENST00000493732 DUSP6Q16828 381 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 ADPRMQ3LIE5 342 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 TIMM50Q3ZCQ8 353 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 OR4C11Q6IEV9 310 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 KIAA1161Q6NSJ0 714 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 DCDC5Q6ZRR9 648 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 C6orf120Q7Z4R8 191 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 ANKRD53Q8N9V6 530 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 DYNC2LI1Q8TCX1 351 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 SLC38A5Q8WUX1 472 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 DNASE1L2Q92874 299 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 ZHX1-C8orf76Q96EF9 292 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 F2RL3Q96RI0 385 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 FERD3LQ96RJ6 166 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 CDCA3Q99618 268 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-209ENST00000493732 ZNF717Q9BY31 904 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-209ENST00000493732 RACGAP1Q9H0H5 632 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 LMAN2LQ9H0V9 348 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 MVB12BQ9H7P6 319 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 LMCD1Q9NZU5 365 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 P2RX2Q9UBL9 471 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 SLC23A2Q9UGH3 650 aa9.18□□□□□ -0.94
NPHP3-209ENST00000493732 PLAGL1Q9UM63 463 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms